Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0190
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 160 1e-38
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 147 1e-34
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 142 3e-33
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 127 1e-28
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 126 3e-28
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 125 7e-28
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 103 2e-21
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 96 5e-19
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 92 8e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 84 2e-15
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 79 6e-14
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 75 7e-13
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 74 2e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 5e-12
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 72 9e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 72 9e-12
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 70 3e-11
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 70 3e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 68 1e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 68 1e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 68 1e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 6e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 66 6e-10
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 65 8e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 65 8e-10
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 63 3e-09
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 63 4e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 63 4e-09
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 60 2e-08
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 60 4e-08
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 59 5e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 9e-08
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 56 3e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 55 8e-07
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 54 2e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 4e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 7e-06
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 1e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 51 1e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 51 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 2e-05
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 49 5e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 5e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 7e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 9e-05
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 1e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 2e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 5e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 7e-04
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 9e-04
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 9e-04
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.003
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 43 0.005
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.005
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.014
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.014
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.13
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.17
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.17
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.17
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.23
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.23
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.30
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 36 0.40
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.53
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.53
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.70
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.92
UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella tul... 35 1.2
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 1.2
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.2
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 1.6
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 2.8
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 3.7
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.7
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 33 3.7
UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Re... 33 4.9
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 6.5
UniRef50_A4CA95 Cluster: Sensor protein; n=1; Pseudoalteromonas ... 32 8.6
UniRef50_Q4UAL7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_A0CA16 Cluster: Chromosome undetermined scaffold_160, w... 32 8.6
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 160 bits (389), Expect = 1e-38
Identities = 79/100 (79%), Positives = 84/100 (84%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGXWGNK 507
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRG WGNK
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 147 bits (357), Expect = 1e-34
Identities = 74/100 (74%), Positives = 79/100 (79%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGXWGNK 507
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RG WGNK
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNK 113
Score = 46.0 bits (104), Expect = 5e-04
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 170 VPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
+PVTKLG L+ + KI LE IYLFSLPIK S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 142 bits (345), Expect = 3e-33
Identities = 64/98 (65%), Positives = 82/98 (83%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGXWG 501
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRG WG
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWG 144
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIK
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 127 bits (307), Expect = 1e-28
Identities = 59/95 (62%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Frame = +1
Query: 226 EHLLVF-FTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 402
EH+ +F +E +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 403 LGVKCSKEVATAIRGAIILAKLSVLPVRRGXWGNK 507
LGVK KEVA +I+G++ILAKL+++PVRRG WG+K
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSK 163
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +2
Query: 152 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
+D+ WVP TKLGRLV++GKI LE I+LFSLPIK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 126 bits (304), Expect = 3e-28
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 478 PVRRGXWGNK 507
P+R+G WGNK
Sbjct: 108 PLRQGYWGNK 117
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 125 bits (301), Expect = 7e-28
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+EF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 433 TAIRGAIILAKLSVLPVRRGXWG 501
AIR II+AKLSV+P+RRG WG
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWG 145
Score = 52.4 bits (120), Expect = 6e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 155 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
++K WVPVTKLGRLV+ GKI +E I+L SLP+K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 103 bits (248), Expect = 2e-21
Identities = 48/82 (58%), Positives = 59/82 (71%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A
Sbjct: 50 REPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAA 109
Query: 433 TAIRGAIILAKLSVLPVRRGXW 498
+AIRGAI AK ++ PVR G W
Sbjct: 110 SAIRGAIARAKCAIRPVRLGLW 131
Score = 37.9 bits (84), Expect = 0.13
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
++++ EW+P T +GRLV+ KI LE I+ FS I+
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIR 50
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 95.9 bits (228), Expect = 5e-19
Identities = 48/66 (72%), Positives = 51/66 (77%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 388 NGHIGL 405
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 91.9 bits (218), Expect = 8e-18
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +1
Query: 349 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGXWGNK 507
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RG WGN+
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNE 113
Score = 33.5 bits (73), Expect = 2.8
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 155 DQKEWVPVTKLGRLVREGKI 214
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/65 (66%), Positives = 48/65 (73%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 388 NGHIG 402
NG+ G
Sbjct: 62 NGYAG 66
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 79.0 bits (186), Expect = 6e-14
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = -2
Query: 507 LVTPXPSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLF 328
LVTP S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L
Sbjct: 29 LVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLL 88
Query: 327 LYRHDLKNLIIQGRAEEEINDLEFLIGK 244
L HDL++ ++Q A+EEI+DLE G+
Sbjct: 89 LDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 75.4 bits (177), Expect = 7e-13
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 93 KEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQ 151
Query: 433 TAIR 444
AI+
Sbjct: 152 GAIQ 155
Score = 52.8 bits (121), Expect = 4e-06
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +2
Query: 158 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIK
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIK 93
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.7 bits (173), Expect = 2e-12
Identities = 35/80 (43%), Positives = 55/80 (68%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 433 TAIRGAIILAKLSVLPVRRG 492
+ IR AI AKL+++PV RG
Sbjct: 80 STIRKAIDKAKLNMIPVMRG 99
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 5e-12
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +1
Query: 256 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 435
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 436 AIRGAIILAKLSVLPVRRG 492
AIR AI AKLS++ VR G
Sbjct: 105 AIRKAIAHAKLSLIKVRVG 123
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 71.7 bits (168), Expect = 9e-12
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA
Sbjct: 77 KETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVA 127
Query: 433 TAIRGAIILAKLSVLPVRRGXWGNK 507
I+ IIL KL ++PV RG G+K
Sbjct: 128 NTIQRVIILTKLPIVPVWRGYCGSK 152
Score = 33.5 bits (73), Expect = 2.8
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 173 PVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
P +KLG LV++ +I L IYLFSLPIK +
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 71.7 bits (168), Expect = 9e-12
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = -2
Query: 501 TPXPSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 322
TP SSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 321 RHDLKNLIIQGRAEEEINDLEFL 253
R D+ N I+Q ++ +NDLEFL
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFL 193
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 69.7 bits (163), Expect = 3e-11
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+EFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 433 TAIRGAIILAKLSV 474
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 69.7 bits (163), Expect = 3e-11
Identities = 36/52 (69%), Positives = 38/52 (73%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 363
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/87 (35%), Positives = 55/87 (63%)
Frame = +1
Query: 238 VFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 417
+FF N + +++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNK--LVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 418 SKEVATAIRGAIILAKLSVLPVRRGXW 498
S + I+ A+ AKL++ +RRG W
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW 176
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 67.7 bits (158), Expect = 1e-10
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +1
Query: 256 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 435
E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++
Sbjct: 43 EPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRV 101
Query: 436 AIRGAIILAKLSVLPVRRG 492
AI+ AI AK++++PVRRG
Sbjct: 102 AIQKAIRDAKMNIIPVRRG 120
Score = 35.5 bits (78), Expect = 0.70
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 161 KEWVPVTKLGRLVREGKIDKLESIYLFSLPI 253
+EW P T +G LV+EGKI ++ ++ +LPI
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPI 41
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A
Sbjct: 34 KEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAA 92
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI+ AI AKL+++ ++RG
Sbjct: 93 PAIKKAIDNAKLNIIEIKRG 112
Score = 32.7 bits (71), Expect = 4.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 161 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
+EW P T+LGRLV G+I + LP+K
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLK 34
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 6e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 325 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 468
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 65.7 bits (153), Expect = 6e-10
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 420
+E EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 45 KEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHG 103
Query: 421 KEVATAIRGAIILAKLSVLPVRRG 492
KEV AIR AI AKL+++ ++RG
Sbjct: 104 KEVGIAIRKAINYAKLNIIEIKRG 127
Score = 32.7 bits (71), Expect = 4.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 164 EWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
EW P TKLG +V+EG+I + I+ IK
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 65.3 bits (152), Expect = 8e-10
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+EFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 433 TAI 441
TA+
Sbjct: 79 TAV 81
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 65.3 bits (152), Expect = 8e-10
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V
Sbjct: 87 KEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVG 145
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI+ AI +AKL+++ V RG
Sbjct: 146 GAIQKAIDVAKLNIIEVDRG 165
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 63.3 bits (147), Expect = 3e-09
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
QE II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++
Sbjct: 75 QEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMR 133
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI A A L+V P++ G
Sbjct: 134 IAIEKATNAAYLNVNPIKMG 153
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 62.9 bits (146), Expect = 4e-09
Identities = 37/79 (46%), Positives = 48/79 (60%)
Frame = +1
Query: 271 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 450
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 451 IILAKLSVLPVRRGXWGNK 507
IIL + S+ G GNK
Sbjct: 55 IILDRSSIAIAWGGWSGNK 73
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 62.9 bits (146), Expect = 4e-09
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V
Sbjct: 36 KESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVG 94
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI+ AI +AKL+++ V RG
Sbjct: 95 GAIQKAIDIAKLNIIDVSRG 114
Score = 33.1 bits (72), Expect = 3.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 167 WVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
W P T+LG+ V EG+ID ++ LP+K S
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 262 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 363
EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 56.8 bits (131), Expect = 3e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
K + KEW+P TKLG LV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 59.7 bits (138), Expect = 4e-08
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
QE II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 56 QESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMR 114
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI A A L+V P++ G
Sbjct: 115 IAIEKANNQALLNVGPIKLG 134
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 59.3 bits (137), Expect = 5e-08
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+EFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 433 TAIRGAIIL 459
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 9e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 283 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 462
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 463 KLSVLPV 483
K + + V
Sbjct: 128 KKTAITV 134
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 55.2 bits (127), Expect = 8e-07
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +1
Query: 250 NQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 429
N++ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 430 ATAI 441
ATAI
Sbjct: 143 ATAI 146
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 53.6 bits (123), Expect = 2e-06
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +1
Query: 319 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGXW 498
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 499 GNK 507
G +
Sbjct: 148 GKR 150
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +2
Query: 158 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNSRSLISSSARP 292
+ +W+P+TKLG LV+E KI LE IY FSL +N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 472 VLPV 483
++ V
Sbjct: 72 LISV 75
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 52.0 bits (119), Expect = 7e-06
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +1
Query: 289 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 468
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 469 SVLPVRRGXWGN 504
+++ V++ G+
Sbjct: 108 NLIKVKQTKKGS 119
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 271 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 450
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 451 IILAKLSVLPV 483
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 405
+E++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 63 KEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 38.3 bits (85), Expect = 0.099
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 173 PVTKLGRLVREGKIDKLESIYLFSLPIK 256
PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 325 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 492
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.1 bits (82), Expect = 0.23
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 161 KEWVPVTKLGRLVREGKIDKLESI 232
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 286 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 465
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 466 LSVLPV 483
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 49.2 bits (112), Expect = 5e-05
Identities = 35/82 (42%), Positives = 43/82 (52%)
Frame = +1
Query: 262 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 441
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 442 RGAIILAKLSVLPVRRGXWGNK 507
+ AI L + + G GNK
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNK 125
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 472 VLPVR 486
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 7e-05
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 478 PV 483
+
Sbjct: 71 KI 72
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 9e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 478 PV 483
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 1e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 277 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 456
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 457 LAKLSVLPV 483
AK +++ V
Sbjct: 98 EAKKNLIRV 106
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 478 --PVRRG 492
PV G
Sbjct: 79 TVPVENG 85
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 2e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 478 PV 483
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 450
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 7e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 478 PV 483
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 9e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 283 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 462
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 463 KLSVL--PVRRG 492
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 9e-04
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 283 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 462
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 463 KLSVLPVRR 489
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 471
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 472 VLPVRRG 492
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 295 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 474
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 475 LPV 483
+ +
Sbjct: 91 VKI 93
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 478 PV 483
V
Sbjct: 128 RV 129
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 472 VLPV 483
V+ V
Sbjct: 88 VIRV 91
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 42.7 bits (96), Expect = 0.005
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 167 WVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
W PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.005
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 478 PV 483
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.014
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 478 PV 483
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.014
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 465
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.9 bits (84), Expect = 0.13
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 157 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQEFEIIDFFLGPS--LNDEVLKIMPVQK 330
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 331 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 483
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.17
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 322 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 489
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.17
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 444
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.17
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 472 VLPVRR 489
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.23
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 453 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 355
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.23
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 444
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.30
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 472 VLPV 483
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 36.3 bits (80), Expect = 0.40
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2
Query: 255 LIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 154
L GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 20 LTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.53
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 295 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 444
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.53
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 304 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 483
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 0.70
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 322 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 489
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 0.92
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 289 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 468
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 469 SVLPVRR 489
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 377
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 179 TKLGRLVREGKIDKLESIYLFSLPIKNSRSLISSSA 286
TK+GRL I+ ++ +YLF PI N+R+L SSA
Sbjct: 125 TKIGRLQSFQNINSMQGVYLFEAPI-NTRALFQSSA 159
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 1.2
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 280 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 459
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 460 AKLSVL 477
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 277 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 441
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 1.6
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 289 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 468
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 469 SVLPVRR 489
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.5 bits (73), Expect = 2.8
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -2
Query: 339 TCLFLYR-HDLKNLIIQGRAEEEIND-LEFLI-GKENK*MLSSLSIFP-SRT 196
TCLF R HDL +LI++G ++EEI D + + + KE + + P SRT
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 3.7
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -2
Query: 363 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 265
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 3.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 304 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 450
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 33.1 bits (72), Expect = 3.7
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 224 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDXDRVHEDRHGLYL 84
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
>UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Rep:
Phage integrase - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 311
Score = 32.7 bits (71), Expect = 4.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 146 RAHDHGRDXDRVHEDRHGLYLHRVIRXRRENRHVHRL 36
R HD GR R+H+ RH + R++R RE V RL
Sbjct: 230 RRHDGGRYQPRLHDLRHTAAVTRLVRWYREGVDVQRL 266
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 6.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 301 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 462
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
>UniRef50_A4CA95 Cluster: Sensor protein; n=1; Pseudoalteromonas
tunicata D2|Rep: Sensor protein - Pseudoalteromonas
tunicata D2
Length = 636
Score = 31.9 bits (69), Expect = 8.6
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 358 FKAFVAIGDNNGHIGLGVKCSKEVATAI-RGAIILAKLSVLP 480
F+ FV N+GH GLG+ K+ AT I +G++ + + LP
Sbjct: 577 FEPFVTSSRNHGHTGLGLSMVKQWATKILQGSVSIKQQEELP 618
>UniRef50_Q4UAL7 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 700
Score = 31.9 bits (69), Expect = 8.6
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 289 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 453
+L +L ++ T+ G+ + AIGD NG+ G+G+ +V +A I
Sbjct: 471 NLKSFILSKKRMRSMTKEGRVYFIRVITAIGDGNGYFGIGIGYGNDVNSAKNAGI 525
>UniRef50_A0CA16 Cluster: Chromosome undetermined scaffold_160,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_160,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 793
Score = 31.9 bits (69), Expect = 8.6
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 250 NQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 405
NQ F+++ +GP + V++ P+ + + F F AIGDN+G+I L
Sbjct: 227 NQNFQVVRTIVGPFSSINVVRFSPMLFKN-SNSNDYFSVF-AIGDNDGNISL 276
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,182,954
Number of Sequences: 1657284
Number of extensions: 8933044
Number of successful extensions: 25916
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 24997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25884
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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