Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0188
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 31 0.64
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 31 0.64
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 31 0.84
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 31 0.84
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83216-6|CAB62783.1| 534|Caenorhabditis elegans Hypothetical pr... 28 7.9
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 28 7.9
U53180-2|AAK68284.1| 477|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 28 7.9
AL117204-21|CAB55157.1| 712|Caenorhabditis elegans Hypothetical... 28 7.9
AF036693-3|AAO61431.1| 544|Caenorhabditis elegans Hypothetical ... 28 7.9
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 690 LTPTRIDGFGYPTRPLSRVSPCFLLSSIIFP 598
+TPT GYP P+ R SP F S+ ++P
Sbjct: 353 MTPTASSSGGYPRVPVPRHSPSFTSSATVYP 383
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 690 LTPTRIDGFGYPTRPLSRVSPCFLLSSIIFP 598
+TPT GYP P+ R SP F S+ ++P
Sbjct: 353 MTPTASSSGGYPRVPVPRHSPSFTSSATVYP 383
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +1
Query: 43 LKITHVTSYANISTTERSNASEFVKKYETICICCLRQDVRLVSLSTCKHKSFFEC 207
LK + + + TE + E + + E C C + + SLS C H+ ++C
Sbjct: 11 LKKNTIQDFGESNMTESPQSKEEIDEPEEECSVCKNEIIDTTSLSDCCHEFCYDC 65
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 73 NISTTERSNASEFVKKYETICICCLRQDVRLVSLSTCKHKSFFECYKIKLPNASVCCLCH 252
NI+ +++ + +++ E +C C + ++ CKH C + L VC LC+
Sbjct: 585 NINRLSKADVVQ-LREREDVCAICFIEMKEEARITPCKHYFHGPCLRKWLAVKMVCPLCY 643
Query: 253 SY 258
+Y
Sbjct: 644 TY 645
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 306 ILTEQVPVRNGTLRLQKTSIQTINIENTESKICKAENEDEIITENNVSQEFSTNP 470
++TEQ V+N L KTS+ + NT K E + ++ E+ VS+ ST P
Sbjct: 343 LVTEQNEVQN--LTNLKTSLAEDSNSNTSETHNKNETSERLVKESFVSEGTSTTP 395
>Z83216-6|CAB62783.1| 534|Caenorhabditis elegans Hypothetical
protein C08F11.8 protein.
Length = 534
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 621 LLSSIIFPYTHHQPIFDFPSPT 556
+L F +T+H P+ DFP+PT
Sbjct: 248 VLPEASFIFTNHIPLMDFPAPT 269
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 133 CICCLRQDVRLVSLSTCKHKSFFECYKIKLPNASVCCLCHS 255
C C + + V+ TCKH C L + SVC +C +
Sbjct: 26 CHICFQVNHEPVTFLTCKHSICAGCAGRWLSSCSVCPMCRT 66
>U53180-2|AAK68284.1| 477|Caenorhabditis elegans Hypothetical
protein D1014.6 protein.
Length = 477
Score = 27.9 bits (59), Expect = 7.9
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = +2
Query: 329 QEWNSSSSENLHSNDQYREYGKQNM 403
+EWN++ ++++ D+++E+ QN+
Sbjct: 87 EEWNNNRTDSIPHEDRHKEWANQNL 111
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3
Query: 176 DRLTKRTSCLKQQIHIVSYFLTNSDAL 96
D++ R LKQ++H +S+ L++SD L
Sbjct: 87 DKVLLRLPVLKQEVHNISFELSSSDVL 113
>AL117204-21|CAB55157.1| 712|Caenorhabditis elegans Hypothetical
protein Y116A8C.33 protein.
Length = 712
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 252 QLLRKFQNFKNQTLRSFKILTEQVPVRNGTLRLQKTSIQTINIENTESKICKAENEDEII 431
QLL+ Q+F N+TL+ F + T+ VP T+ + I+ I+ + +I +N + I
Sbjct: 426 QLLKNNQSFVNETLKRF-LETKSVPKFLITVNELRDRIKAIDYK----EIFIFQNLSKAI 480
Query: 432 TENNVSQEF 458
E SQEF
Sbjct: 481 EEKLKSQEF 489
>AF036693-3|AAO61431.1| 544|Caenorhabditis elegans Hypothetical
protein C49A9.8 protein.
Length = 544
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 621 LLSSIIFPYTHHQPIFDFPSPT 556
+L F +++H P+ DFPSPT
Sbjct: 259 VLPEASFIFSNHIPVLDFPSPT 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,908,713
Number of Sequences: 27780
Number of extensions: 325613
Number of successful extensions: 856
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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