Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0188
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    24   1.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   5.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   9.0  

>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +2

Query: 338 NSSSSENLHSNDQYREYGKQ 397
           +S S++ +H+N+ Y+ Y K+
Sbjct: 316 SSLSNKTIHNNNNYKNYNKK 335


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 509 FKVTVLVKEIIFQWIRTE 456
           F  TVL + +I +WI+TE
Sbjct: 268 FIPTVLDRNVIDKWIKTE 285


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 600 PYTHHQPIFDFPSPTIL 550
           P+T+++ IF FP   +L
Sbjct: 590 PFTYNERIFGFPGRLLL 606


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 600 PYTHHQPIFDFPSPTIL 550
           P+T+++ IF FP   +L
Sbjct: 590 PFTYNERIFGFPGRLLL 606


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 366 QTINIENTESKIC 404
           Q +++ENTE+K C
Sbjct: 180 QEVSMENTENKSC 192


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 226 NASVCCLCHSY*ESFKTL 279
           N++VC LCH   + F+TL
Sbjct: 400 NSAVCALCH---KVFRTL 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,061
Number of Sequences: 438
Number of extensions: 4009
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)