Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0186
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z67735-3|CAA91531.3|  513|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical
           protein Y68A4A.2 protein.
          Length = 309

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 256 IEILLSFIYLIIMEDDCDLLTFSVW 330
           + I + ++Y++I+  DC    FSVW
Sbjct: 147 VPIKIKYLYIVIIAKDCSCFVFSVW 171


>Z67735-3|CAA91531.3|  513|Caenorhabditis elegans Hypothetical
           protein C15A7.2 protein.
          Length = 513

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
 Frame = -3

Query: 642 GHYLILIIKFSLSNFFCLEFF-----YQMMK*NSTYLIHIHS*INMYQFIFSRCNSTYSH 478
           G +++ I  + L  F+ ++FF     Y   +    YL+ I        F+ +   S    
Sbjct: 314 GMFIVFICSYLLMQFWEIKFFDPAEVYAQSESLPAYLLVIWRLTAWVFFVVAALMSRSDS 373

Query: 477 PQLTPFSLLFIPETSPFTLKQLIFTCISNY 388
           PQ + F   F+   +P+     IFT I+N+
Sbjct: 374 PQKSAFFTSFVFLMTPWFWAPPIFTMIANF 403


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,116
Number of Sequences: 27780
Number of extensions: 346952
Number of successful extensions: 649
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)