Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0184
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   5.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.9  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 172 VFLLVGQPAFHLLFESCPL 116
           VF +  +P  +L+F  CP+
Sbjct: 146 VFFVENEPILYLIFSYCPI 164


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 374 SNYAKSSNDEQVWSSRFSSTKHH 442
           + + K S+DEQ W +   ST ++
Sbjct: 352 NGFPKRSSDEQQWRNNQPSTSNN 374


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -2

Query: 112 WXSQECYRRLVSQEPRWRLLFVGLQHHPVRAFRLLFL 2
           W S      L  +  +W LLF  L H   R   L+ L
Sbjct: 146 WLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQL 182


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -2

Query: 112 WXSQECYRRLVSQEPRWRLLFVGLQHHPVRAFRLLFL 2
           W S      L  +  +W LLF  L H   R   L+ L
Sbjct: 72  WLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQL 108


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 532 GWCWWKTDHSNHQIS*PSST 591
           G  W+    SNH +  P++T
Sbjct: 250 GHSWYLQSTSNHDVGAPATT 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,476
Number of Sequences: 336
Number of extensions: 3047
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)