Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0184
         (713 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U82083-1|AAB82068.1|  877|Homo sapiens metabotropic glutamate re...    32   2.3  
AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane hel...    32   2.3  

>U82083-1|AAB82068.1|  877|Homo sapiens metabotropic glutamate
           receptor 6 protein protein.
          Length = 877

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -2

Query: 418 AAPDLFIIATFGIVATVMPVEVFTRVTNCGVLLACAPAPVFFMMTGI 278
           AAP L ++A  GIVAT   V  F R  N  ++ A      + ++TGI
Sbjct: 586 AAPPL-LLAVLGIVATTTVVATFVRYNNTPIVRASGRELSYVLLTGI 631


>AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 1520

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -2

Query: 418 AAPDLFIIATFGIVATVMPVEVFTRVTNCGVLLACAPAPVFFMMTGI 278
           AAP L ++A  GIVAT   V  F R  N  ++ A      + ++TGI
Sbjct: 743 AAPPL-LLAVLGIVATTTVVATFVRYNNTPIVRASGRELSYVLLTGI 788


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,107,963
Number of Sequences: 237096
Number of extensions: 1956656
Number of successful extensions: 4123
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4123
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)