Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0184
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015268-1|AAT94497.1| 1500|Drosophila melanogaster LD29768p pro...    33   0.39 
AY060983-1|AAL28531.1|  883|Drosophila melanogaster GM14007p pro...    33   0.39 
AJ320236-1|CAC44472.1| 1500|Drosophila melanogaster host cell fa...    33   0.39 
AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell fa...    33   0.39 
AE014135-74|AAS64608.1| 1500|Drosophila melanogaster CG1710-PD, ...    33   0.39 
AE014135-73|AAN06530.1| 1500|Drosophila melanogaster CG1710-PC, ...    33   0.39 
AE014135-72|AAN06529.1| 1500|Drosophila melanogaster CG1710-PB, ...    33   0.39 
AE014135-71|AAF59349.2| 1500|Drosophila melanogaster CG1710-PA, ...    33   0.39 
AF022364-1|AAC47804.1| 1096|Drosophila melanogaster B4 protein.        30   2.7  
AE014134-3611|EAA46014.2|  171|Drosophila melanogaster CG40439-P...    29   4.7  
AY061420-1|AAL28968.1| 1107|Drosophila melanogaster LD35137p pro...    29   6.3  
AY060445-1|AAL25484.1| 1107|Drosophila melanogaster LD48089p pro...    29   6.3  
AE014134-2363|AAF53312.1| 1107|Drosophila melanogaster CG9239-PB...    29   6.3  
AE014134-2362|AAF53317.2| 1107|Drosophila melanogaster CG9239-PA...    29   6.3  

>BT015268-1|AAT94497.1| 1500|Drosophila melanogaster LD29768p
           protein.
          Length = 1500

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 VKTSTGMTVATMPKVAMMNRSGAAVSQAQNITP--GATIVKLVSNTVGGNKIITLPLICC 521
           VKTS GMTV T+PKV      G          P   + I ++  +TV G++ I  P++  
Sbjct: 707 VKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQGSTVPGSQ-IQKPIVSG 765

Query: 522 N*VRLV 539
           N ++LV
Sbjct: 766 NVLKLV 771


>AY060983-1|AAL28531.1|  883|Drosophila melanogaster GM14007p
           protein.
          Length = 883

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 VKTSTGMTVATMPKVAMMNRSGAAVSQAQNITP--GATIVKLVSNTVGGNKIITLPLICC 521
           VKTS GMTV T+PKV      G          P   + I ++  +TV G++ I  P++  
Sbjct: 90  VKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQGSTVPGSQ-IQKPIVSG 148

Query: 522 N*VRLV 539
           N ++LV
Sbjct: 149 NVLKLV 154


>AJ320236-1|CAC44472.1| 1500|Drosophila melanogaster host cell
           factor protein.
          Length = 1500

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 VKTSTGMTVATMPKVAMMNRSGAAVSQAQNITP--GATIVKLVSNTVGGNKIITLPLICC 521
           VKTS GMTV T+PKV      G          P   + I ++  +TV G++ I  P++  
Sbjct: 707 VKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQGSTVPGSQ-IQKPIVSG 765

Query: 522 N*VRLV 539
           N ++LV
Sbjct: 766 NVLKLV 771


>AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell
           factor HCF protein.
          Length = 1500

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 VKTSTGMTVATMPKVAMMNRSGAAVSQAQNITP--GATIVKLVSNTVGGNKIITLPLICC 521
           VKTS GMTV T+PKV      G          P   + I ++  +TV G++ I  P++  
Sbjct: 707 VKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQGSTVPGSQ-IQKPIVSG 765

Query: 522 N*VRLV 539
           N ++LV
Sbjct: 766 NVLKLV 771


>AE014135-74|AAS64608.1| 1500|Drosophila melanogaster CG1710-PD,
           isoform D protein.
          Length = 1500

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 VKTSTGMTVATMPKVAMMNRSGAAVSQAQNITP--GATIVKLVSNTVGGNKIITLPLICC 521
           VKTS GMTV T+PKV      G          P   + I ++  +TV G++ I  P++  
Sbjct: 707 VKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQGSTVPGSQ-IQKPIVSG 765

Query: 522 N*VRLV 539
           N ++LV
Sbjct: 766 NVLKLV 771


>AE014135-73|AAN06530.1| 1500|Drosophila melanogaster CG1710-PC,
           isoform C protein.
          Length = 1500

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 VKTSTGMTVATMPKVAMMNRSGAAVSQAQNITP--GATIVKLVSNTVGGNKIITLPLICC 521
           VKTS GMTV T+PKV      G          P   + I ++  +TV G++ I  P++  
Sbjct: 707 VKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQGSTVPGSQ-IQKPIVSG 765

Query: 522 N*VRLV 539
           N ++LV
Sbjct: 766 NVLKLV 771


>AE014135-72|AAN06529.1| 1500|Drosophila melanogaster CG1710-PB,
           isoform B protein.
          Length = 1500

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 VKTSTGMTVATMPKVAMMNRSGAAVSQAQNITP--GATIVKLVSNTVGGNKIITLPLICC 521
           VKTS GMTV T+PKV      G          P   + I ++  +TV G++ I  P++  
Sbjct: 707 VKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQGSTVPGSQ-IQKPIVSG 765

Query: 522 N*VRLV 539
           N ++LV
Sbjct: 766 NVLKLV 771


>AE014135-71|AAF59349.2| 1500|Drosophila melanogaster CG1710-PA,
           isoform A protein.
          Length = 1500

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 VKTSTGMTVATMPKVAMMNRSGAAVSQAQNITP--GATIVKLVSNTVGGNKIITLPLICC 521
           VKTS GMTV T+PKV      G          P   + I ++  +TV G++ I  P++  
Sbjct: 707 VKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQGSTVPGSQ-IQKPIVSG 765

Query: 522 N*VRLV 539
           N ++LV
Sbjct: 766 NVLKLV 771


>AF022364-1|AAC47804.1| 1096|Drosophila melanogaster B4 protein.
          Length = 1096

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 354 TSTGMTVATMPKVAMMNRSGAAVSQAQNITPGATIVKLVSNTVGGNKIIT 503
           T+T    AT P  A     GA  +      PG+T+    + TVGGN + T
Sbjct: 33  TTTSAAAATTP--AASATKGATTTTTTTTNPGSTVGGAGAGTVGGNGVAT 80


>AE014134-3611|EAA46014.2|  171|Drosophila melanogaster CG40439-PA,
           isoform A protein.
          Length = 171

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +2

Query: 308 RCASK*YTAICYPCEDLNGHDCSNYAKSSNDEQVWSSRFSSTKHH 442
           R  SK Y  I   CE L    C N   S +   V S+R+S  + H
Sbjct: 53  RIVSKFYKDILVKCEKLTQFSCINPEMSRHAHLVLSARYSELRSH 97


>AY061420-1|AAL28968.1| 1107|Drosophila melanogaster LD35137p
           protein.
          Length = 1107

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 354 TSTGMTVATMPKVAMMNRSGAAVSQAQNITPGATIVKLVSNTVGGNKIIT 503
           T+T    AT P  +     GA  + A    PG+T+    +  VGGN + T
Sbjct: 44  TTTSAAAATTPTASATK--GATTTTATTTNPGSTVGGAGAGPVGGNGVAT 91


>AY060445-1|AAL25484.1| 1107|Drosophila melanogaster LD48089p
           protein.
          Length = 1107

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 354 TSTGMTVATMPKVAMMNRSGAAVSQAQNITPGATIVKLVSNTVGGNKIIT 503
           T+T    AT P  +     GA  + A    PG+T+    +  VGGN + T
Sbjct: 44  TTTSAAAATTPTASATK--GATTTTATTTNPGSTVGGAGAGPVGGNGVAT 91


>AE014134-2363|AAF53312.1| 1107|Drosophila melanogaster CG9239-PB,
           isoform B protein.
          Length = 1107

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 354 TSTGMTVATMPKVAMMNRSGAAVSQAQNITPGATIVKLVSNTVGGNKIIT 503
           T+T    AT P  +     GA  + A    PG+T+    +  VGGN + T
Sbjct: 44  TTTSAAAATTPTASATK--GATTTTATTTNPGSTVGGAGAGPVGGNGVAT 91


>AE014134-2362|AAF53317.2| 1107|Drosophila melanogaster CG9239-PA,
           isoform A protein.
          Length = 1107

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 354 TSTGMTVATMPKVAMMNRSGAAVSQAQNITPGATIVKLVSNTVGGNKIIT 503
           T+T    AT P  +     GA  + A    PG+T+    +  VGGN + T
Sbjct: 44  TTTSAAAATTPTASATK--GATTTTATTTNPGSTVGGAGAGPVGGNGVAT 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,185,947
Number of Sequences: 53049
Number of extensions: 635491
Number of successful extensions: 1530
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)