Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0183
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   158   5e-39
BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   158   5e-39
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   158   5e-39
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   158   5e-39
BT023884-1|ABA81818.1|  697|Drosophila melanogaster RE55168p pro...    29   5.6  
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp...    29   7.3  
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,...    29   7.3  
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,...    29   7.3  
BT016067-1|AAV36952.1|  626|Drosophila melanogaster LP07963p pro...    28   9.7  
AY060996-1|AAL28544.1|  221|Drosophila melanogaster HL01241p pro...    28   9.7  
AE014297-783|AAN13394.1|  580|Drosophila melanogaster CG8036-PD,...    28   9.7  
AE014297-782|AAN13393.2|  626|Drosophila melanogaster CG8036-PC,...    28   9.7  
AE014297-781|AAF54265.3|  626|Drosophila melanogaster CG8036-PB,...    28   9.7  

>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  158 bits (384), Expect = 5e-39
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = +1

Query: 256 VSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRY 435
           +++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRY
Sbjct: 90  ITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRY 149

Query: 436 PDPLIKVNDSIQLDIATTKIMDFISLSPGTCV*SREAVTWGAWATIVSRERHPRLPFDIV 615
           PDPLI  NDS+Q+DIA+ KI D+I    G           G   T+V+RERHP   FDIV
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPG-SFDIV 208

Query: 616 HIQ 624
           HI+
Sbjct: 209 HIK 211



 Score =  109 bits (261), Expect = 4e-24
 Identities = 50/60 (83%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNES*KL 182
           PKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E  K+
Sbjct: 5   PKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKI 64



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 170 ILKIVKQRLIKVDGKVRTDPTYPAGFMDVSQLRR 271
           + KIV QRL+KV GKVRTDPTYPAG+MDV  L +
Sbjct: 61  VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEK 94


>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  158 bits (384), Expect = 5e-39
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = +1

Query: 256 VSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRY 435
           +++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRY
Sbjct: 90  ITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRY 149

Query: 436 PDPLIKVNDSIQLDIATTKIMDFISLSPGTCV*SREAVTWGAWATIVSRERHPRLPFDIV 615
           PDPLI  NDS+Q+DIA+ KI D+I    G           G   T+V+RERHP   FDIV
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPG-SFDIV 208

Query: 616 HIQ 624
           HI+
Sbjct: 209 HIK 211



 Score =  111 bits (266), Expect = 1e-24
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNES*KL 182
           PKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E  K+
Sbjct: 5   PKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKI 64



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +2

Query: 170 ILKIVKQRLIKVDGKVRTDPTYPAGFMDVSQLRR 271
           + KIV QRL+KVDGKVRTDPTYPAG+MDV  L +
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  158 bits (384), Expect = 5e-39
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = +1

Query: 256 VSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRY 435
           +++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRY
Sbjct: 90  ITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRY 149

Query: 436 PDPLIKVNDSIQLDIATTKIMDFISLSPGTCV*SREAVTWGAWATIVSRERHPRLPFDIV 615
           PDPLI  NDS+Q+DIA+ KI D+I    G           G   T+V+RERHP   FDIV
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPG-SFDIV 208

Query: 616 HIQ 624
           HI+
Sbjct: 209 HIK 211



 Score =  111 bits (266), Expect = 1e-24
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNES*KL 182
           PKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E  K+
Sbjct: 5   PKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKI 64



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +2

Query: 170 ILKIVKQRLIKVDGKVRTDPTYPAGFMDVSQLRR 271
           + KIV QRL+KVDGKVRTDPTYPAG+MDV  L +
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  158 bits (384), Expect = 5e-39
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = +1

Query: 256 VSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRY 435
           +++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRY
Sbjct: 90  ITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRY 149

Query: 436 PDPLIKVNDSIQLDIATTKIMDFISLSPGTCV*SREAVTWGAWATIVSRERHPRLPFDIV 615
           PDPLI  NDS+Q+DIA+ KI D+I    G           G   T+V+RERHP   FDIV
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPG-SFDIV 208

Query: 616 HIQ 624
           HI+
Sbjct: 209 HIK 211



 Score =  111 bits (266), Expect = 1e-24
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNES*KL 182
           PKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E  K+
Sbjct: 5   PKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKI 64



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +2

Query: 170 ILKIVKQRLIKVDGKVRTDPTYPAGFMDVSQLRR 271
           + KIV QRL+KVDGKVRTDPTYPAG+MDV  L +
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94


>BT023884-1|ABA81818.1|  697|Drosophila melanogaster RE55168p
           protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 23/77 (29%), Positives = 27/77 (35%)
 Frame = +3

Query: 423 HHPLSRPTYQSQRFHPVRHCNYEDYGLHQFESGNLCMITGGRNLGRVGNHRVPRETSPAS 602
           H P SR        HP  H  + +Y  HQ E         G N G   +H+      P  
Sbjct: 94  HSPPSRIHSPPTEHHP-DHVGHYEYFQHQHEQ---IFHHEGANGG--ASHKQQTHHHPNK 147

Query: 603 FRHCAHSKDSTGDNNLS 653
             HC     S GD N S
Sbjct: 148 HEHCPTGHQSAGDGNTS 164


>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
            protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 426  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 268
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
            isoform F protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 426  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 268
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
            isoform E protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 426  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 268
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


>BT016067-1|AAV36952.1|  626|Drosophila melanogaster LP07963p
           protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +1

Query: 382 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFISLS-PGTCV 531
           G +++    T  G TI YP   +    +++L  A TK + FI  S P TCV
Sbjct: 434 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 483


>AY060996-1|AAL28544.1|  221|Drosophila melanogaster HL01241p
           protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +1

Query: 382 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFISLS-PGTCV 531
           G +++    T  G TI YP   +    +++L  A TK + FI  S P TCV
Sbjct: 29  GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 78


>AE014297-783|AAN13394.1|  580|Drosophila melanogaster CG8036-PD,
           isoform D protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +1

Query: 382 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFISLS-PGTCV 531
           G +++    T  G TI YP   +    +++L  A TK + FI  S P TCV
Sbjct: 388 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 437


>AE014297-782|AAN13393.2|  626|Drosophila melanogaster CG8036-PC,
           isoform C protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +1

Query: 382 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFISLS-PGTCV 531
           G +++    T  G TI YP   +    +++L  A TK + FI  S P TCV
Sbjct: 434 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 483


>AE014297-781|AAF54265.3|  626|Drosophila melanogaster CG8036-PB,
           isoform B protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +1

Query: 382 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFISLS-PGTCV 531
           G +++    T  G TI YP   +    +++L  A TK + FI  S P TCV
Sbjct: 434 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 483


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,010,633
Number of Sequences: 53049
Number of extensions: 767236
Number of successful extensions: 2039
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2031
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)