Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0181
(737 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0LQ61 Cluster: Sua5/YciO/YrdC/YwlC; n=1; Herpetosiphon... 39 0.15
UniRef50_A7RL85 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.4
UniRef50_Q2JU07 Cluster: Sua5/YciO/YrdC/YwlC family protein; n=2... 35 1.8
UniRef50_Q08UF6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q4UIZ1 Cluster: Inositol phosphatase, putative; n=2; Th... 35 2.4
UniRef50_Q9SIV3 Cluster: Expressed protein; n=1; Arabidopsis tha... 34 3.2
UniRef50_Q4DCU8 Cluster: Protein kinase, putative; n=2; Trypanos... 34 4.2
UniRef50_Q23JZ2 Cluster: Formin Homology 2 Domain containing pro... 34 4.2
UniRef50_A6SEF8 Cluster: Putative uncharacterized protein; n=2; ... 34 4.2
UniRef50_A4R5R2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_A3VNS8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q91TI4 Cluster: T117; n=1; Tupaiid herpesvirus 1|Rep: T... 33 7.3
UniRef50_A7QLR9 Cluster: Chromosome chr18 scaffold_121, whole ge... 33 7.3
UniRef50_Q4Q1Z3 Cluster: Putative uncharacterized protein; n=3; ... 33 7.3
UniRef50_A0E257 Cluster: Chromosome undetermined scaffold_74, wh... 33 7.3
UniRef50_O28905 Cluster: Hydrogenase expression/formation regula... 33 7.3
UniRef50_Q1QER6 Cluster: Permease YjgP/YjgQ precursor; n=2; Psyc... 33 9.7
UniRef50_A3V9E3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A4RAB7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_Q0LQ61 Cluster: Sua5/YciO/YrdC/YwlC; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Sua5/YciO/YrdC/YwlC -
Herpetosiphon aurantiacus ATCC 23779
Length = 207
Score = 38.7 bits (86), Expect = 0.15
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 281 QVKTGGSGAVPVKL-SAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGNLPL 457
Q+ T G + V++ + G + + P+ + N+ GK TPN+ Q V + AG +PL
Sbjct: 106 QLLTAGKATIAVRVPNHGQLRNLIRQFGTPIAGTSANLHGKATPNTAQAVAEQLAGRVPL 165
Query: 458 KLGAGNVKIGTSNVLVKQQAECP 526
L G + +V E P
Sbjct: 166 VLDGGFAMGEQPSTIVDLSGEQP 188
>UniRef50_A7RL85 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 326
Score = 35.5 bits (78), Expect = 1.4
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 448
PR V K VP K+ N+P K+ VP K+ N+ K+ P +V +V N
Sbjct: 15 PRNVPTKVHPRN-VPTKVHPRNVPTKVLPRNVPTKVLPRNVPAKVHPRNVPT--KVHPRN 71
Query: 449 LPLKLGAGNV--KIGTSNVLVK 508
+P K+ NV K+ NV K
Sbjct: 72 VPTKVHPRNVPTKVHPRNVPTK 93
Score = 35.5 bits (78), Expect = 1.4
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 448
PR V K VP K+ N+P K+ VP K+ N+ K+ P +V + +V N
Sbjct: 51 PRNVPAKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNV--LTKVHPRN 107
Query: 449 LPLKLGAGNV--KIGTSNVLVK 508
+P K+ NV K+ NV K
Sbjct: 108 VPTKVHPRNVPTKVHPRNVPTK 129
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 448
PR V K VP K+ N+P K+ VP K+ N+ K+ P +V +V N
Sbjct: 132 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 188
Query: 449 LPLKLGAGNV--KIGTSNVLVK 508
+P K+ NV K+ NV K
Sbjct: 189 VPTKVHPRNVPTKVHPRNVPTK 210
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 448
PR V K VP K+ N+P K+ VP K+ N+ K+ P +V +V N
Sbjct: 168 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 224
Query: 449 LPLKLGAGNV--KIGTSNVLVK 508
+P K+ NV K+ NV K
Sbjct: 225 VPTKVHPRNVPTKVHPRNVPTK 246
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 448
PR V K VP K+ N+P K+ VP K+ N+ K+ P +V +V N
Sbjct: 204 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 260
Query: 449 LPLKLGAGNV--KIGTSNVLVK 508
+P K+ NV K+ NV K
Sbjct: 261 VPTKVHPRNVPTKVHPRNVPTK 282
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 448
PR V K VP K+ N+P K+ VP K+ N+ K+ P +V +V N
Sbjct: 240 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 296
Query: 449 LPLKLGAGNV--KIGTSNVLVK 508
+P K+ NV K+ NV K
Sbjct: 297 VPTKVHPRNVPTKVHPRNVPTK 318
Score = 34.7 bits (76), Expect = 2.4
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 308 VPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGNLPLKLGAGNV--K 481
VP K+ N+P K+ VP K+ N+ K+ P +V +V N+P K+ NV K
Sbjct: 9 VPTKVLPRNVPTKVHPRNVPTKVHPRNVPTKVLPRNVPT--KVLPRNVPAKVHPRNVPTK 66
Query: 482 IGTSNVLVK 508
+ NV K
Sbjct: 67 VHPRNVPTK 75
Score = 34.7 bits (76), Expect = 2.4
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 448
PR V K VP K+ N+P K+ VP K+ N+ K+ P +V +V N
Sbjct: 96 PRNVLTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 152
Query: 449 LPLKLGAGNV--KIGTSNVLVK 508
+P K+ NV K+ NV K
Sbjct: 153 VPTKVHPRNVPTKVHPRNVPTK 174
>UniRef50_Q2JU07 Cluster: Sua5/YciO/YrdC/YwlC family protein; n=2;
Synechococcus|Rep: Sua5/YciO/YrdC/YwlC family protein -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 366
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 272 RYVQVKTGGSGAVPVKLSAGNMP-VKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 448
R + T G V +++ A + L VPL + N G+L+P S Q V AG
Sbjct: 113 RVPDLVTSGLPTVALRMPAHPVAQALLRAVQVPLAAPSANRFGRLSPTSAQAVYAELAGR 172
Query: 449 LPLKLGAGNVKIGTSNVLVK 508
+P L G +G + ++K
Sbjct: 173 IPYILDGGECSVGLESTVLK 192
>UniRef50_Q08UF6 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 504
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +2
Query: 257 GAGTPRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNS 415
G G R + T + PVK SAGN + GNAVPL + T++ PN+
Sbjct: 436 GKGGRREIATVTAEAEQTPVKPSAGNSTARATGNAVPLAL--TSLPPPAHPNA 486
>UniRef50_Q4UIZ1 Cluster: Inositol phosphatase, putative; n=2;
Theileria|Rep: Inositol phosphatase, putative - Theileria
annulata
Length = 1524
Score = 34.7 bits (76), Expect = 2.4
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +2
Query: 326 AGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGNLPLKLGAGNVK--IGTSNV 499
AG+ P+ + G + K GT + G LT N G++ AG L L+ G+GN+K IGT N
Sbjct: 1125 AGSAPITIKGTIIVTKSGT--LGGSLTLN-----GRL-AGKLTLENGSGNIKVTIGTGNT 1176
Query: 500 L 502
L
Sbjct: 1177 L 1177
>UniRef50_Q9SIV3 Cluster: Expressed protein; n=1; Arabidopsis
thaliana|Rep: Expressed protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 420
Score = 34.3 bits (75), Expect = 3.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -1
Query: 623 P*XWLSQECYRRPSFTGTP--VATFVCRFATPPCKGIPPAVLQEHYSYQ 483
P W+S Y P GT + T RF PP GIP A+ H Y+
Sbjct: 305 PPFWVSDSPYWHPMHNGTTPYLPTVATRFRAPPVAGIPHALPPHHTMYK 353
>UniRef50_Q4DCU8 Cluster: Protein kinase, putative; n=2; Trypanosoma
cruzi|Rep: Protein kinase, putative - Trypanosoma cruzi
Length = 550
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 601 NVTGALVSQEPRWRLLFVGLQHHPVRAFRLLFYKNITRTNLDITGTKFQG*ISSSDLSY 425
N+ AL+ + RWRL HH R L++ NI N + G SS D ++
Sbjct: 285 NLLCALLQPDVRWRLSCTDALHHAFFTSRCLYHGNIVSANFSVFSPSSNGLQSSIDSNF 343
>UniRef50_Q23JZ2 Cluster: Formin Homology 2 Domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Formin
Homology 2 Domain containing protein - Tetrahymena
thermophila SB210
Length = 1473
Score = 33.9 bits (74), Expect = 4.2
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = -3
Query: 471 PAPSFKGRFPAVTCPTFCTLLGVNFP*MLVVPIFSGTALPASLTGILPALNFTGTAPLPP 292
PAP G P + F L + + P F G P + GI PA G P PP
Sbjct: 711 PAPPIGGIPPVIKFVLFINLFIITILIKIKAPQFGGIPPPPPIGGIPPAPQIGGIPPAPP 770
Query: 291 V 289
+
Sbjct: 771 I 771
>UniRef50_A6SEF8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 1585
Score = 33.9 bits (74), Expect = 4.2
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 278 VQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGNLPL 457
VQV T ++P+KL G+ N+ +K+GT + KL S K+ + L
Sbjct: 1237 VQVPTVERPSLPLKLKIGSSSALKLNNSSSIKLGTPSSAIKLGSPSAIKLN--NSSGLKF 1294
Query: 458 KLGAGNVKIGTSN 496
+G +KIGTS+
Sbjct: 1295 GNSSGGLKIGTSS 1307
>UniRef50_A4R5R2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1153
Score = 33.9 bits (74), Expect = 4.2
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +3
Query: 93 SPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTAQSGAQIVLGSAS 254
SPA T SS+ K A T T SG+ PGT STA+ A L +S
Sbjct: 20 SPAAKKTSSSTTAAKRPASTSSTTTTTTSGLRRPGTASSSTAKPAATSSLSKSS 73
>UniRef50_A3VNS8 Cluster: Putative uncharacterized protein; n=1;
Parvularcula bermudensis HTCC2503|Rep: Putative
uncharacterized protein - Parvularcula bermudensis
HTCC2503
Length = 415
Score = 33.5 bits (73), Expect = 5.5
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 129 QIKVAAVTPQGVTRIVSGVSTPGTVRVSTAQSGAQIVLGSASEAPVRRVT 278
++ V AVTP+G +V+ P T+ T G +V G APV R +
Sbjct: 295 RVSVPAVTPEGCALVVAPRPRPSTLMKLTEPFGQGVVQGRRMSAPVARAS 344
>UniRef50_Q91TI4 Cluster: T117; n=1; Tupaiid herpesvirus 1|Rep: T117
- Tupaiid herpesvirus 1 (strain 1) (TuHV-1) (Herpesvirus
tupaia (strain1))
Length = 393
Score = 33.1 bits (72), Expect = 7.3
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = -3
Query: 444 PAVTCPTFCTLLGVNFP*MLVVPIFSGTALP---ASLTGILPALNFTGTAPLPPVFTCT* 274
P+ TCP T F L P F A P A T + P + T P+PPV T T
Sbjct: 5 PSATCPGVPT-----FTLTLTSPTFPTIAFPTVEAGETAVAPVTLYFSTEPIPPVCTTTP 59
Query: 273 RGVPAPQRP 247
P P P
Sbjct: 60 PPPPPPPPP 68
>UniRef50_A7QLR9 Cluster: Chromosome chr18 scaffold_121, whole
genome shotgun sequence; n=4; Vitis vinifera|Rep:
Chromosome chr18 scaffold_121, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 247
Score = 33.1 bits (72), Expect = 7.3
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = -3
Query: 498 TLLVPILTLPAPSFKGRFPAVTCPTFCTLLGVNFP*MLVVPIFSGTALPAS 346
TLLVP TLP F R P T P LL V +P V +G+A+P S
Sbjct: 42 TLLVPTSTLPCSCF-SRSPG-TGPELSPLLSVGYPAERVAACRAGSAIPLS 90
>UniRef50_Q4Q1Z3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1827
Score = 33.1 bits (72), Expect = 7.3
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -3
Query: 501 RTLLVPILTLPAPSFKGRFPAVT--CPTFCTLLGVNFP*MLVVPIFSGTA-LPASLT 340
R+L +P+L LPA S G+ A CP F + L ++ P L++ SG A LP T
Sbjct: 1380 RSLCLPVLELPARSAAGKASAAAALCPPFSSQLHLSEPATLLLLHMSGCAGLPGGAT 1436
>UniRef50_A0E257 Cluster: Chromosome undetermined scaffold_74, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_74,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 203
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2
Query: 253 EADPNTICAPDCAVETRTVPGVETPL 176
+A PNT P+CA TRTVPG E L
Sbjct: 25 KAKPNTYPIPNCAFGTRTVPGKEETL 50
>UniRef50_O28905 Cluster: Hydrogenase expression/formation
regulatory protein; n=1; Archaeoglobus fulgidus|Rep:
Hydrogenase expression/formation regulatory protein -
Archaeoglobus fulgidus
Length = 740
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 149 DAARCDKNRKWRLDTRNRTCLYSTVWCTDC 238
D A CDK + LD++NR LY CTDC
Sbjct: 98 DVAVCDKCLEEVLDSKNRRYLYPFTSCTDC 127
>UniRef50_Q1QER6 Cluster: Permease YjgP/YjgQ precursor; n=2;
Psychrobacter|Rep: Permease YjgP/YjgQ precursor -
Psychrobacter cryohalolentis (strain K5)
Length = 428
Score = 32.7 bits (71), Expect = 9.7
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +2
Query: 272 RYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQ---VTA 442
R QV TG SG + L G AG+ ++G + LT +S + + + T
Sbjct: 228 RAEQVDTGNSGVTQLDLFQGRRYEVGAGSLKYNQVGFDRYRITLTESSKEVITEDNIETQ 287
Query: 443 GNLPL-KLGAGNVKIGTSNVLVKQQAECPYRVVL 541
PL + GN ++G++N + Q E YR+ L
Sbjct: 288 AIGPLWQAATGNAQVGSNNAMRAAQGELGYRLSL 321
>UniRef50_A3V9E3 Cluster: Putative uncharacterized protein; n=1;
Loktanella vestfoldensis SKA53|Rep: Putative
uncharacterized protein - Loktanella vestfoldensis SKA53
Length = 169
Score = 32.7 bits (71), Expect = 9.7
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 75 AKAIVKSPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTAQSGAQIVLGSAS 254
A A+ KSP N PS+ AA Q + + G TP T+RV G L +++
Sbjct: 8 AIALAKSPENLMPPSAITGTSPAACA-QSMIAVNCGTPTPATMRVVQIDPGPIPTLTASA 66
Query: 255 EAPVR 269
P+R
Sbjct: 67 PTPIR 71
>UniRef50_A4RAB7 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 322
Score = 32.7 bits (71), Expect = 9.7
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 350 AGNAVPLKIG-TTNIQGKLTPNSVQKVGQVTAGNLPL-KLGAGNVKIGTSNVLVKQQAEC 523
+G++ P G + G P+ V VG V P+ L + + + S V+ Q+E
Sbjct: 71 SGSSPPSPFGDASRYAGPAQPSEV--VGNVARQFPPVFALYSNGMSLSRSYVIGPHQSEP 128
Query: 524 PYRVVLQTYKQKSPPGFL*N*GAGNIPVIASXRGHDF 634
Y V L T SPP L N + P++AS H F
Sbjct: 129 LYAVELHTGLSSSPPLVLHNGPDASCPMLASLEFHTF 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,010,394
Number of Sequences: 1657284
Number of extensions: 17027104
Number of successful extensions: 48015
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 45109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47941
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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