Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0181
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.5  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   5.9  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   5.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.9  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   7.9  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +3

Query: 108 ATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVST 215
           +T SSSQ ++        +  +++ + +PG+ + ST
Sbjct: 384 STDSSSQSVEDPQQVEAAIVHLIANLPSPGSDQRST 419


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = -1

Query: 266 YRRLRGRS*HNLCTRLCCRDTYGSWCRD 183
           Y   R    HNLC + C    Y   C D
Sbjct: 73  YMLFREPQLHNLCRKNCFTTDYFKGCID 100


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = -1

Query: 266 YRRLRGRS*HNLCTRLCCRDTYGSWCRD 183
           Y   R    HNLC + C    Y   C D
Sbjct: 73  YMLFREPQLHNLCRKNCFTTDYFKGCID 100


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 551 CRFATPPCKGIPPAVLQEHYS 489
           C  +  PC  I  A  Q+HY+
Sbjct: 559 CEESLQPCNPIYDAYCQKHYA 579


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 308 VPVKLSAGNMPVKLAGNAVPLKIGTT 385
           VP+     N  VKLA     L +GTT
Sbjct: 62  VPIITRVINEEVKLASGDYTLPVGTT 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,331
Number of Sequences: 336
Number of extensions: 4110
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)