Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0180
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.6  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 492 LITYRAPQTRSWEKRRISPRARPQAGE*RHQQHP 593
           L     P     EK  I+PR RP+A + + +  P
Sbjct: 296 LAAQEIPGQNPGEKTNIAPRERPRATDHQRRNEP 329


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -3

Query: 433 RVLAFFSRSIEEXFAKPGRFTVSIEK*APMAKYWIDAATSSWICFLIML 287
           RVL   +  +   F+ P  F    ++   M + WID  T  W  ++ ++
Sbjct: 162 RVLVMLAWLLSILFSLPTVFLFEEKQVQSMPQCWIDLQTWQWKVYITLV 210


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 475 RLRKPTSSRTGPRKHG 522
           +L++P  S+  PRKHG
Sbjct: 97  KLQEPQPSQHCPRKHG 112


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +3

Query: 249 HQDEWLTMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVN 377
           H D     E  CY   +K+ ++E    I+        S+D  N
Sbjct: 217 HPDSGNMFENGCYLRRQKRFKDEKKELIRQTHKSPSHSVDNSN 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,434
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)