Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0180
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 30 1.6
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 29 2.1
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 29 2.1
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 29 2.1
AL031632-1|CAA21004.1| 248|Caenorhabditis elegans Hypothetical ... 29 3.7
AF016452-11|AAB66012.1| 443|Caenorhabditis elegans Hypothetical... 28 4.9
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81061-6|CAB02938.1| 341|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81039-11|CAB02780.1| 341|Caenorhabditis elegans Hypothetical p... 27 8.6
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 27 8.6
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 27 8.6
>Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical
protein F08B12.1 protein.
Length = 866
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -3
Query: 496 MRSVYGACQLSPHEQVVNELGRVLAFFSRSIEEXFAKPGRFT-VSIEK*APMAKYWIDAA 320
MR +G +Q+VN + + + +E T ++ + A + Y ID
Sbjct: 729 MREHFGRAAKEEFQQMVNNIDQYIVHVKSQMESEVTSCQPLTQIARQTTAAVCAYTIDPY 788
Query: 319 TSSWICFLIML 287
+W+C LI L
Sbjct: 789 NGTWMCMLICL 799
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 294 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 398
+ KQI E+ AS YL+M YF D V P A +
Sbjct: 16 VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKF 50
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 380 PRLREXFFDAATEEREHATKLIDYLLMRG 466
P + + F + + EEREHAT+L+ +RG
Sbjct: 45 PNIAKFFKEQSDEEREHATELMRVQNLRG 73
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 267 TMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXYSSMLR 413
+M C N + Q EV++S ++ M YF + T + F+ Y LR
Sbjct: 131 SMRCVCKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 267 TMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXYSSMLR 413
+M C N + Q EV++S ++ M YF + T + F+ Y LR
Sbjct: 131 SMRCVCKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 267 TMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXYSSMLR 413
+M C N + Q EV++S ++ M YF + T + F+ Y LR
Sbjct: 131 SMRCVCKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179
>AL031632-1|CAA21004.1| 248|Caenorhabditis elegans Hypothetical
protein Y32B12B.1 protein.
Length = 248
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = +2
Query: 335 VLSHGGLLLDRYGEPPRLREXFFDAATEEREHATKLIDYLLMRGKLTGSVNRPHHVQGPA 514
++S G L + YG P + FD+ E+E ++L ++ + + RP V A
Sbjct: 159 LISFGNYLYELYGPEPEKKVETFDSVQREKEPKSELSRFISAKHVFSA---RPFGVI-CA 214
Query: 515 NTVVGEAAHQPSSTPSSWRVTSPTASGRSSR 607
NTV + H + S+ R A R R
Sbjct: 215 NTVTRKCRHFCTRCESTVRKVRKHADDRMHR 245
>AF016452-11|AAB66012.1| 443|Caenorhabditis elegans Hypothetical
protein T05H4.6 protein.
Length = 443
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 508 PRKHGRGRSGASALEHALKLESDVTNSIREVIKNLREHF 624
P+KHGRG G SA+ A N +R+V +N E F
Sbjct: 185 PKKHGRG--GQSAVRFARLRNEKRHNYVRKVAENSVEQF 221
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 536 AHQPSSTPSSWRVTSPTASGRSSRTCESTFNDY 634
A PSS+ SS + TS + RSS T FN Y
Sbjct: 278 APSPSSSASSEQSTSTGKASRSSTTTPHRFNPY 310
>Z81061-6|CAB02938.1| 341|Caenorhabditis elegans Hypothetical
protein C25D7.12 protein.
Length = 341
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +1
Query: 376 TAPASRXILRCCD*RTRARDQAH*LPAHEGKADRLRKPTSSRTGPRKHGRGRSGASALEH 555
TA A+ +L C + R D+ A K+ R K S R +SG S+
Sbjct: 50 TASATSTVLAMCSSKDRQADRKKSKKASATKSSRASKSQKSAKSTRSGKSSKSGHSSRGK 109
Query: 556 ALKLESDVTNSIR 594
K + + S+R
Sbjct: 110 PSKSKKSKSKSVR 122
>Z81039-11|CAB02780.1| 341|Caenorhabditis elegans Hypothetical
protein C25D7.12 protein.
Length = 341
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +1
Query: 376 TAPASRXILRCCD*RTRARDQAH*LPAHEGKADRLRKPTSSRTGPRKHGRGRSGASALEH 555
TA A+ +L C + R D+ A K+ R K S R +SG S+
Sbjct: 50 TASATSTVLAMCSSKDRQADRKKSKKASATKSSRASKSQKSAKSTRSGKSSKSGHSSRGK 109
Query: 556 ALKLESDVTNSIR 594
K + + S+R
Sbjct: 110 PSKSKKSKSKSVR 122
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 536 AHQPSSTPSSWRVTSPTASGRSSRTCESTFNDY 634
A PSS+ SS + TS + RSS T FN Y
Sbjct: 278 APSPSSSASSEQSTSTGKASRSSTTTPHRFNPY 310
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -1
Query: 153 SYNHRFFDDTQKNMRS*KQ*LYKSSLY 73
SYNHRFF K++ S K+ LYK+ ++
Sbjct: 99 SYNHRFF--IHKDISSDKKFLYKNDIF 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,402,503
Number of Sequences: 27780
Number of extensions: 264046
Number of successful extensions: 823
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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