Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0180
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.82 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +2

Query: 470 LTGSVNRPHHVQGPANTVVGEAAHQPSSTPSSWRVTSPTASGRSSRT 610
           L+ + + PH    PA T+        ++T ++   T+P  +  +S T
Sbjct: 641 LSSTHSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTTQNASAT 687



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/42 (23%), Positives = 15/42 (35%)
 Frame = +2

Query: 509  PANTVVGEAAHQPSSTPSSWRVTSPTASGRSSRTCESTFNDY 634
            PAN   G+A  Q            P   G+ +R     + +Y
Sbjct: 1002 PANAQQGQAQAQAKPQSQEANKPKPATGGKGTRPKRGKYRNY 1043


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 437 KLIDYLLMRGKLTGSVNRPHHVQGPANTVVGE 532
           KL+ + L   KL   V  PH++   A T +GE
Sbjct: 159 KLLTFDLKTSKLVKQVEIPHNIAVNATTGMGE 190


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 10  ANRTYLFEFPANYKSPSAPVCVKA 81
           A RTYLF+   N      P  V A
Sbjct: 545 AGRTYLFDLDYNESEEQCPYTVDA 568


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 527 GEAAHQPSSTPSSWRVTSPTASGRSSRT 610
           G ++  PSS  S +   SPT+ G  + T
Sbjct: 87  GSSSPSPSSPSSFFSSVSPTSLGSENYT 114


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 46  YKSPSAPVCVKA*LIQLLLSRAHIFLSI 129
           Y SP++ VC+ A LI L +    +++ I
Sbjct: 621 YISPASQVCIAAALIALQIVLTLVWMII 648


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 46  YKSPSAPVCVKA*LIQLLLSRAHIFLSI 129
           Y SP++ VC+ A LI L +    +++ I
Sbjct: 711 YISPASQVCIAAALIALQIVLTLVWMII 738


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,104
Number of Sequences: 438
Number of extensions: 2901
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)