Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0176
         (593 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4FHG6 Cluster: ATP synthase subunit 8; n=2; Aphidomorp...    34   2.2  
UniRef50_Q8DVZ1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_Q4YJ80 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  

>UniRef50_Q4FHG6 Cluster: ATP synthase subunit 8; n=2;
           Aphidomorpha|Rep: ATP synthase subunit 8 -
           Daktulosphaira vitifoliae (grape phylloxera)
          Length = 56

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +2

Query: 77  TNSFVLLIYLFVIIYSYLITSI*FSYFSTYKF 172
           TN  + LIYLF+II+ +L++ I F++F    F
Sbjct: 9   TNKLINLIYLFIIIFMFLMSIIYFNFFKIKNF 40


>UniRef50_Q8DVZ1 Cluster: Putative uncharacterized protein; n=1;
           Streptococcus mutans|Rep: Putative uncharacterized
           protein - Streptococcus mutans
          Length = 337

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 18/53 (33%), Positives = 32/53 (60%)
 Frame = +2

Query: 8   LKLINFYLIL*IEIHYTSHHVILTNSFVLLIYLFVIIYSYLITSI*FSYFSTY 166
           L + +F+L + I IH+++H  +L N F+  +Y  ++  S+LI S+ F  F  Y
Sbjct: 100 LMITSFFLFMVIRIHHSTH--LLFNRFIASLYA-LLSASFLIFSVAFIAFMLY 149


>UniRef50_Q4YJ80 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 35

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 47  IHYTSHHVILTNSFVLLIYLFVI-IYSYLI 133
           +H+    ++L N+F+L IY F++  YSYLI
Sbjct: 3   LHFRRSFIVLKNNFLLCIYYFIVYTYSYLI 32


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,512,833
Number of Sequences: 1657284
Number of extensions: 6228504
Number of successful extensions: 13186
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13164
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)