BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0174 (708 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 161 1e-40 SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 160 2e-40 SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 160 2e-40 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 95 1e-20 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 95 1e-20 SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 74 2e-14 SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 37 0.003 SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.008 SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.008 SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 34 0.017 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.030 SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 32 0.070 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.21 SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.28 SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.49 SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce... 28 1.1 SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 28 1.5 SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 27 2.6 SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.5 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.6 SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 26 6.1 SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 25 8.0 SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 8.0 >SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual Length = 460 Score = 161 bits (390), Expect = 1e-40 Identities = 80/119 (67%), Positives = 91/119 (76%) Frame = +3 Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332 + + +E E G G+ + + + K ITIDIALWKFET KY VT+IDAPGH Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95 Query: 333 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509 RDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNK Sbjct: 96 RDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNK 154 Score = 141 bits (341), Expect = 1e-34 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +1 Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 229 DKLKAERE 252 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 63.7 bits (148), Expect = 2e-11 Identities = 28/49 (57%), Positives = 39/49 (79%) Frame = +2 Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 652 +MD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+ Sbjct: 154 KMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMI 200 >SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual Length = 460 Score = 160 bits (389), Expect = 2e-40 Identities = 79/119 (66%), Positives = 91/119 (76%) Frame = +3 Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332 + + +E E G G+ + + + K ITIDIALWKFET KY VT+IDAPGH Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95 Query: 333 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509 RDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNK Sbjct: 96 RDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNK 154 Score = 141 bits (341), Expect = 1e-34 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +1 Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 229 DKLKAERE 252 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 63.7 bits (148), Expect = 2e-11 Identities = 28/49 (57%), Positives = 39/49 (79%) Frame = +2 Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 652 +MD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+ Sbjct: 154 KMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMI 200 >SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 160 bits (389), Expect = 2e-40 Identities = 79/119 (66%), Positives = 91/119 (76%) Frame = +3 Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332 + + +E E G G+ + + + K ITIDIALWKFET KY VT+IDAPGH Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95 Query: 333 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509 RDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNK Sbjct: 96 RDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNK 154 Score = 141 bits (341), Expect = 1e-34 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +1 Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 229 DKLKAERE 252 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 63.7 bits (148), Expect = 2e-11 Identities = 28/49 (57%), Positives = 39/49 (79%) Frame = +2 Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 652 +MD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+ Sbjct: 154 KMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMI 200 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 94.7 bits (225), Expect = 1e-20 Identities = 50/119 (42%), Positives = 64/119 (53%) Frame = +3 Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332 Q H E G G+ + T+ +T+D+A FE+ K I DAPGH Sbjct: 210 QKLHNEAANSGKGS----FSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGH 265 Query: 333 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509 RDFI MI G S AD AVL+V + FE G +NGQTREHA L LG+ +++V VNK Sbjct: 266 RDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNK 324 Score = 72.5 bits (170), Expect = 5e-14 Identities = 31/63 (49%), Positives = 44/63 (69%) Frame = +1 Query: 61 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 240 K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234 Query: 241 AER 249 ER Sbjct: 235 EER 237 Score = 40.3 bits (90), Expect = 3e-04 Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%) Frame = +2 Query: 530 YSEPRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNML 652 +SE RF+EIK VS + IK +G+ + V FVPIS G N++ Sbjct: 330 WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLI 371 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 94.7 bits (225), Expect = 1e-20 Identities = 41/83 (49%), Positives = 58/83 (69%) Frame = +3 Query: 261 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 440 T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + G Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362 Query: 441 QTREHALLAFTLGVKQLIVGVNK 509 QTREHA+LA T G+ L+V +NK Sbjct: 363 QTREHAVLARTQGINHLVVVINK 385 Score = 80.6 bits (190), Expect = 2e-16 Identities = 35/64 (54%), Positives = 47/64 (73%) Frame = +1 Query: 61 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 240 K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295 Query: 241 AERE 252 ERE Sbjct: 296 EERE 299 >SPBC9B6.04c |tuf1||mitochondrial translation elongation factor EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 73.7 bits (173), Expect = 2e-14 Identities = 38/84 (45%), Positives = 54/84 (64%) Frame = +3 Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437 ITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ Sbjct: 102 ITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP------ 155 Query: 438 GQTREHALLAFTLGVKQLIVGVNK 509 QTREH LLA +GVKQ++V +NK Sbjct: 156 -QTREHLLLARQVGVKQIVVYINK 178 Score = 35.1 bits (77), Expect = 0.010 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +1 Query: 55 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 141 ++K H+NI IGHVD GK+T T I KC Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76 >SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 770 Score = 36.7 bits (81), Expect = 0.003 Identities = 24/76 (31%), Positives = 36/76 (47%) Frame = +3 Query: 285 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 464 FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R + + Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRYNVP 199 Query: 465 AFTLGVKQLIVGVNKW 512 + K +G + W Sbjct: 200 RISFVNKMDRMGADPW 215 Score = 29.1 bits (62), Expect = 0.65 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 Query: 73 NIVVIGHVDSGKSTTTGHLIYKCGGI 150 NI + H+DSGK+T T ++Y G I Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86 >SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 842 Score = 35.5 bits (78), Expect = 0.008 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +1 Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 144 MGK N+ VI HVD GKST T L+ K G Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44 Score = 27.9 bits (59), Expect = 1.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elongation factor 2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 842 Score = 35.5 bits (78), Expect = 0.008 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +1 Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 144 MGK N+ VI HVD GKST T L+ K G Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44 Score = 27.9 bits (59), Expect = 1.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 34.3 bits (75), Expect = 0.017 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +3 Query: 303 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 482 +V+ +D PGH + M+ G + D A+L++A QT EH + + Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162 Query: 483 KQLIVGVNK 509 K +I+ NK Sbjct: 163 KHIIILQNK 171 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 33.5 bits (73), Expect = 0.030 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 285 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410 F+ ++T +D PGH F G + AD VL+VA G Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256 >SPBC660.10 |||translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 813 Score = 32.3 bits (70), Expect = 0.070 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +3 Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410 ITI+ A F + +ID PGH DF + + D AV I+ G Sbjct: 79 ITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129 Score = 28.7 bits (61), Expect = 0.86 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +1 Query: 73 NIVVIGHVDSGKSTTTGHLIYKCG 144 N+ +I H+D+GK+T T ++Y G Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 30.7 bits (66), Expect = 0.21 Identities = 12/45 (26%), Positives = 23/45 (51%) Frame = +3 Query: 276 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410 ++ + Y + +ID PGH DF ++ + + +L+V A G Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160 >SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1000 Score = 30.3 bits (65), Expect = 0.28 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410 Y + +ID+PGH DF + + + D A ++V A G Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130 >SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1079 Score = 29.5 bits (63), Expect = 0.49 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 312 IIDAPGHRDFIKNMITGTSQADCAVLIV 395 IID PGH F GTS + A+L++ Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580 >SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces pombe|chr 1|||Manual Length = 371 Score = 28.3 bits (60), Expect = 1.1 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 1/96 (1%) Frame = -2 Query: 527 VVQWNPFVYSYDELFDTEGESEQGMLTGLTVL-RDTSFEFTGTGSYDEHSAISLRGSCDH 351 V++ P Y+Y LF E VL + T Y H ++LRG Sbjct: 61 VLKEEPGKYTYMSLFTMPSTEEDYYFNATRVLIHRLKYHPTTKSKYPIH-ILALRG---- 115 Query: 350 VLDEISVSRSINDGNIVLASFELPESNIDCDTSSRS 243 +DE + R DG V+ + S+I DTSS S Sbjct: 116 -VDEWKIERFRKDGASVIVIDPIASSDIVYDTSSFS 150 >SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 926 Score = 27.9 bits (59), Expect = 1.5 Identities = 27/79 (34%), Positives = 37/79 (46%) Frame = +3 Query: 393 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYP 572 VA GT E GI NG E+A+ A +I V++ P++H + KSRR+YP Sbjct: 47 VAEGTAE---GIVSNG---EYAVGAMGAAPTNIIGSVDQQPPVSHTS-----HKSRRQYP 95 Query: 573 HTSRRLATTQLLSLSCPFL 629 L T S + P L Sbjct: 96 AEVFELTNTLAASPAPPSL 114 >SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pombe|chr 1|||Manual Length = 695 Score = 27.1 bits (57), Expect = 2.6 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +2 Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLGAFQPK 670 +MD E + E +F + + S++K+ F+PISG G N+ Q K Sbjct: 418 KMDEIE--WDENKFINLVNSIQSFLKESCGIIEKSKFIPISGLKGTNLTSISQEK 470 >SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 983 Score = 26.6 bits (56), Expect = 3.5 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 315 IDAPGHRDFIKNMITGTSQADCAVLIV 395 ID PGH DF+ + + +D VL+V Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 26.2 bits (55), Expect = 4.6 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +3 Query: 258 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 350 + I+I + E +++ T+ID PG DFI N Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103 >SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces pombe|chr 3|||Manual Length = 384 Score = 25.8 bits (54), Expect = 6.1 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -2 Query: 323 SINDGNIVLASFELPESNIDCDTSSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 144 S++ + L S+ P S T+ A ++YL+ PL S S S + +R SIP Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364 >SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 367 Score = 25.4 bits (53), Expect = 8.0 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = +3 Query: 531 TVSPDLRKSRRKYPHTSRRLATTQLLSLSC 620 + +PD+ ++PHT +R +T + L + C Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRC 174 >SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pombe|chr 2|||Manual Length = 662 Score = 25.4 bits (53), Expect = 8.0 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = -3 Query: 235 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 107 V +PK I I++ F P S S C+Y S D W T Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,059,086 Number of Sequences: 5004 Number of extensions: 64965 Number of successful extensions: 266 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 264 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 329179816 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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