Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0173
         (713 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q113C2 Cluster: Methyltransferase FkbM family; n=1; Tri...    34   3.0  
UniRef50_Q232M1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q07RG5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_Q6C2T0 Cluster: Yarrowia lipolytica chromosome F of str...    33   9.2  

>UniRef50_Q113C2 Cluster: Methyltransferase FkbM family; n=1;
           Trichodesmium erythraeum IMS101|Rep: Methyltransferase
           FkbM family - Trichodesmium erythraeum (strain IMS101)
          Length = 485

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +2

Query: 410 ARKINSKENDQISQTWSLIQRNLTLQIGYMTEQTHCRNMKVQKQD 544
           +RK+   E + I+Q W L+  NLT+  G+  +Q  C+ M  + Q+
Sbjct: 26  SRKLEQFEEEYINQGWGLMSPNLTI-YGFDADQDACKKMNTKLQE 69


>UniRef50_Q232M1 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 628

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 18/87 (20%), Positives = 44/87 (50%)
 Frame = +2

Query: 332 VKAQDLIIDHAVYSRLLQEVLASETPARKINSKENDQISQTWSLIQRNLTLQIGYMTEQT 511
           +++Q++ +D  ++S    E+L +    ++IN K+ +Q +  +   Q+N  +Q+G + +  
Sbjct: 274 IQSQNITVD--IFSNFQDEILETNEENQQINQKQKEQQAFKFKGYQQNQNIQLGNIFQDK 331

Query: 512 HCRNMKVQKQDYMNSSLLKCLITR*ED 592
              N+   K   +N      +I + +D
Sbjct: 332 LSSNITTNKSFNLNQFRRSPIIKQNQD 358


>UniRef50_Q07RG5 Cluster: Putative uncharacterized protein; n=1;
           Rhodopseudomonas palustris BisA53|Rep: Putative
           uncharacterized protein - Rhodopseudomonas palustris
           (strain BisA53)
          Length = 165

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 548 MNSSLLKCLITR*ED*YFWATRLGSYGREDGDYSSLSGQQENSLRHFLD 694
           +N SL   ++ R     F  T  G + + D D++  + QQ N LR FL+
Sbjct: 108 LNESLYHAILPRTPLVVFHETTTGPFSKTDADFADWAPQQPNELREFLE 156


>UniRef50_Q6C2T0 Cluster: Yarrowia lipolytica chromosome F of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome F of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 687

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 22/83 (26%), Positives = 37/83 (44%)
 Frame = -1

Query: 701 SPRLENVSRNFPADLTDWSNPHLLDHNCPILLPRSTSLLNVLSGILEEKNSCNPAFVLSC 522
           S  L  +S N+     DWSN  L+D  C      +T +++ L+ +L    +C   + L+ 
Sbjct: 77  SGNLRMISGNYTGPALDWSNAALID--C----DNTTDVIDALNEVLINNPACMILYSLNS 130

Query: 521 SGSVFVQSYNLFVA*DSSVLVTM 453
               F + Y +F A    V  T+
Sbjct: 131 DACHFTRPYRVFSADIGFVFTTV 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,262,625
Number of Sequences: 1657284
Number of extensions: 12778348
Number of successful extensions: 30134
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30113
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)