Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0173
         (713 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0255 - 42322111-42322308,42322658-42322750,42323127-423233...    30   1.6  
09_04_0104 + 14626756-14626828,14627658-14627791,14628544-146285...    29   3.7  
03_01_0285 + 2205165-2206781                                           29   3.7  
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420...    28   6.4  

>01_07_0255 -
           42322111-42322308,42322658-42322750,42323127-42323344,
           42323476-42323642,42324097-42324207,42324267-42324409,
           42324492-42324710,42324975-42325055,42325202-42325381,
           42325971-42326301,42326775-42326888,42327036-42327127,
           42327631-42328059
          Length = 791

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/50 (38%), Positives = 21/50 (42%)
 Frame = +1

Query: 505 TNTLPEHESTKAGLHEFFSSKMPDNTLRRLVLLGNKIGQLWSRRWGLLQS 654
           T T P+   T    H        DN   RL  LG  IG +  RRW L QS
Sbjct: 557 TQTHPQKHHTSRSEHRLLLRA--DNADSRLTPLGRDIGLIDDRRWELYQS 604


>09_04_0104 +
           14626756-14626828,14627658-14627791,14628544-14628593,
           14628684-14628776,14628897-14628988,14629279-14629385,
           14631536-14631712,14631808-14632476
          Length = 464

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 629 DHNCPILLPRSTSLLNVLSGILEEKNSCNPAFVLS 525
           +HNCP+ LP  T  L  +SG      S  P  + S
Sbjct: 337 NHNCPVTLPFKTQTLQHMSGATSLLLSITPGIINS 371


>03_01_0285 + 2205165-2206781
          Length = 538

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 423 LIFLAGVSDARTSCNSLE-YTAWSIIRSCAL 334
           L FLA V+DAR +C+  + +T WS+  +C L
Sbjct: 168 LPFLAHVADARKTCDLQDVFTRWSLDATCHL 198


>11_01_0532 +
           4201374-4201401,4201475-4202652,4204316-4204670,
           4204791-4204864,4206965-4207056,4207500-4207573,
           4207680-4207822,4207889-4207909
          Length = 654

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 523 HESTKAGLHEFFSSKMPDNTLRRLVLLGNKI 615
           H   +  + +FFS K P NT  + +LL NK+
Sbjct: 225 HRLERQVVPQFFSGKSPGNTPEKYMLLRNKV 255


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,648,950
Number of Sequences: 37544
Number of extensions: 345405
Number of successful extensions: 742
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)