BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0173
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein. 30 7.2
S80437-1|AAB35516.1| 468|Homo sapiens fatty acid synthase protein. 30 7.2
BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase pro... 30 7.2
BC014634-1|AAH14634.2| 353|Homo sapiens FASN protein protein. 30 7.2
BC007909-1|AAH07909.1| 439|Homo sapiens FASN protein protein. 30 7.2
BC007267-1|AAH07267.1| 930|Homo sapiens Unknown (protein for IM... 30 7.2
AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase pro... 30 7.2
AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein pr... 30 7.2
>U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein.
Length = 2509
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 427 RVDFPGWGFRC*NFL*QPGIHSMVNYQILCLDTLSPQGFYQ 305
R+ P +G +C IHS+ Y I C+ + P+G Y+
Sbjct: 2261 RLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYR 2301
>S80437-1|AAB35516.1| 468|Homo sapiens fatty acid synthase protein.
Length = 468
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 427 RVDFPGWGFRC*NFL*QPGIHSMVNYQILCLDTLSPQGFYQ 305
R+ P +G +C IHS+ Y I C+ + P+G Y+
Sbjct: 220 RLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYR 260
>BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase protein.
Length = 2511
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 427 RVDFPGWGFRC*NFL*QPGIHSMVNYQILCLDTLSPQGFYQ 305
R+ P +G +C IHS+ Y I C+ + P+G Y+
Sbjct: 2263 RLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYR 2303
>BC014634-1|AAH14634.2| 353|Homo sapiens FASN protein protein.
Length = 353
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 427 RVDFPGWGFRC*NFL*QPGIHSMVNYQILCLDTLSPQGFYQ 305
R+ P +G +C IHS+ Y I C+ + P+G Y+
Sbjct: 105 RLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYR 145
>BC007909-1|AAH07909.1| 439|Homo sapiens FASN protein protein.
Length = 439
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 427 RVDFPGWGFRC*NFL*QPGIHSMVNYQILCLDTLSPQGFYQ 305
R+ P +G +C IHS+ Y I C+ + P+G Y+
Sbjct: 191 RLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYR 231
>BC007267-1|AAH07267.1| 930|Homo sapiens Unknown (protein for
IMAGE:3138929) protein.
Length = 930
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 427 RVDFPGWGFRC*NFL*QPGIHSMVNYQILCLDTLSPQGFYQ 305
R+ P +G +C IHS+ Y I C+ + P+G Y+
Sbjct: 682 RLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYR 722
>AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase protein.
Length = 2511
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 427 RVDFPGWGFRC*NFL*QPGIHSMVNYQILCLDTLSPQGFYQ 305
R+ P +G +C IHS+ Y I C+ + P+G Y+
Sbjct: 2263 RLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYR 2303
>AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein
protein.
Length = 2548
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 427 RVDFPGWGFRC*NFL*QPGIHSMVNYQILCLDTLSPQGFYQ 305
R+ P +G +C IHS+ Y I C+ + P+G Y+
Sbjct: 2300 RLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYR 2340
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,503,352
Number of Sequences: 237096
Number of extensions: 2055349
Number of successful extensions: 3543
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3543
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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