Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0173
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.9  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   5.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 598 VLVFSTCYQAF*KRRIHVILL 536
           VL+  TC +   K RIH++L+
Sbjct: 58  VLILITCRKRVSKSRIHIMLM 78


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 386 EVLASETPARKINSKENDQISQ-TWSLIQRNLTLQIGYMTEQTHCRNMKVQ 535
           +++A+      ++ +++D+ S   W+ + R   L   Y T QTH + ++ Q
Sbjct: 4   QMMAATFDFPSLSFEDSDEGSNWNWNTLLRPNFLDGWYQTLQTHMKKVREQ 54


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 198 LERLVLPFFDSRRWDILALNA 136
           LE LV+  FDS  W+ +  +A
Sbjct: 9   LELLVVKTFDSETWEAIKKDA 29


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 198 LERLVLPFFDSRRWDILALNA 136
           LE LV+  FDS  W+ +  +A
Sbjct: 9   LELLVVKTFDSETWEAIKKDA 29


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 478 KIPLY**PCLTDLVILFRVDFPGWGF 401
           +IPLY    L D V  F +D P W +
Sbjct: 636 EIPLYGKMTLDDKVFGFPLDRPMWAW 661


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 478 KIPLY**PCLTDLVILFRVDFPGWGF 401
           +IPLY    L D V  F +D P W +
Sbjct: 636 EIPLYGKMTLDDKVFGFPLDRPMWAW 661


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,585
Number of Sequences: 438
Number of extensions: 3341
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)