Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0172
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    30   0.021
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.46 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 0.021
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 90  DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKA-TEAYFERQKTSK 230
           + E +D D+     E+V  DE+ DTK ++K  +K   E Y E ++ +K
Sbjct: 234 EEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNK 281


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = -3

Query: 304 VILFFILIYSFVTNLKTPYTSFIIFFEVFCLSKYASVAFSLSFSLH 167
           +I  + + Y+F  + +  Y S +    VFC   Y    + + +S+H
Sbjct: 119 LINLYTINYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIYYSVH 164


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 150 HHYPLLHRIPNFHRHPCFLHL 88
           HHY   H  PNF   P  + L
Sbjct: 171 HHYARYHPYPNFGVPPAGIPL 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,665
Number of Sequences: 336
Number of extensions: 2301
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)