Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0172
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 34 0.097
03_06_0195 + 32256771-32258792 33 0.22
03_06_0146 - 31976538-31978643,31978653-31978751 33 0.22
03_05_0713 - 27070063-27070126,27070202-27070290,27070369-270704... 31 0.90
06_02_0315 - 14230234-14232771 31 1.2
12_02_1029 - 25521641-25521852,25521978-25522035,25522142-255221... 30 1.6
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 29 3.6
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 29 3.6
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216... 29 3.6
08_01_0838 - 8185083-8185910 29 4.8
11_06_0185 + 21018045-21022307 28 6.4
07_03_1126 - 24166758-24166879,24166948-24167386,24167708-241678... 28 6.4
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 28 8.4
06_03_1500 + 30602846-30603185,30603244-30603323,30603477-306035... 28 8.4
02_04_0421 - 22756903-22757384,22757585-22758047 28 8.4
>03_02_0901 +
12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 34.3 bits (75), Expect = 0.097
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 87 IDAENKDGD-ESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMK 242
+D E DGD E LE+ EEVDN DTK K K E YF++ K I K
Sbjct: 670 VDDEEVDGDFEDLETGEEVDN----DTK-KSKREETNGGGYFDKLKEEIEIRK 717
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 105 DGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYG 254
D +ESL+SD+E +N ++K KE L + + S N+M+LVYG
Sbjct: 540 DSEESLDSDDETEN----NSKWKESLLARTL------SRRSANLMQLVYG 579
>03_06_0195 + 32256771-32258792
Length = 673
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAY 206
D E D +E SDEE+D++E D C E++ E+ E +
Sbjct: 273 DEEESDDEEDSYSDEEIDDEEESD--CDEEIDEEEEEEH 309
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAY 206
D E D +E SDEE+D++E D C E++ E+ E +
Sbjct: 331 DEEESDDEEDSYSDEEIDDEEESD--CDEEIDEEEEEEH 367
>03_05_0713 -
27070063-27070126,27070202-27070290,27070369-27070428,
27071110-27071215,27071309-27071428,27072340-27072476,
27072561-27072647,27073660-27073956
Length = 319
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFD 161
G D ++ DGD+ E DEE D+DE D
Sbjct: 29 GGDNDDDDGDDGTEEDEEEDDDEEGD 54
>06_02_0315 - 14230234-14232771
Length = 845
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKA 194
D D DE E DEE ++ + D +CKE+ + A
Sbjct: 356 DENENDDDEEEEEDEEDEDGADTDKECKEQARDSA 390
>12_02_1029 -
25521641-25521852,25521978-25522035,25522142-25522191,
25522280-25522585,25522666-25523068,25524573-25524624,
25525523-25525572,25526151-25526306,25526987-25527286
Length = 528
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVLR 263
G + + DE D++ D+D NF T C ++L + TE +R + K+V +
Sbjct: 377 GSNTSSSFSDEVAAVDDDDDDDNNFLTICSQELLARGTE-LLKRTRKGALHWKVVSVYIH 435
Query: 264 LVTKL*IRMKKR 299
+ ++MK R
Sbjct: 436 RTGVVMLKMKSR 447
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDENFDTKCKEKLSEK 191
D E+ +GDE LE ++VD++E + + +E+ +K
Sbjct: 125 DEEDGEGDEELEELDDVDDEEESEEEEEEEEEDK 158
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDENFDTKCKEKL 182
+ E+ +GDE LE ++VD++E + + KE+L
Sbjct: 123 EEEDGEGDEELEELDDVDDEEESEEEEKEEL 153
>02_05_0665 -
30720842-30721003,30721290-30721448,30721555-30721687,
30722042-30722227,30722377-30722906
Length = 389
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 295 FFILIYSFVTNLKTPYTSFIIFFEVFCLSKYASVAFSLSFSLHLV 161
+F+++ S V L + +F +FF VFC++ + +L L V
Sbjct: 229 YFMIVQSNVHMLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCV 273
>08_01_0838 - 8185083-8185910
Length = 275
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 123 ESDEEVDNDENFDTKCKEKLSEKATEAYF 209
+++EE D+DE+ + KC+ + +EK + YF
Sbjct: 107 DAEEEEDDDEDEEEKCR-RFAEKCIDPYF 134
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSK 230
D ++ D D+ E +EE D+DE E E+ F + +SK
Sbjct: 518 DEDSNDDDDDEEEEEEDDDDEEEPIHLHEDQYEQILREVFTKNASSK 564
>07_03_1126 -
24166758-24166879,24166948-24167386,24167708-24167875,
24168388-24168675,24169468-24169575,24169759-24169811,
24170033-24170192,24170353-24170442,24170902-24170953,
24171156-24171283
Length = 535
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSE 188
G D ENKD + + E D+E + +E + K K K S+
Sbjct: 314 GGDKENKDAEANKEEDDEEEGEEE-EEKAKVKKSK 347
>07_01_0513 +
3828196-3828309,3828408-3828722,3828823-3828879,
3829668-3829826,3829918-3830028,3830173-3830259,
3830359-3830591,3830808-3830886,3831173-3831316,
3831529-3831568,3831667-3831729,3832193-3832224,
3832320-3832361,3832444-3832557
Length = 529
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 96 ENKDGDESLESDEEVDNDENFDTKCK 173
E GD+S ++D+E+D E+ D K K
Sbjct: 362 EISSGDDSSDNDDEIDVPEDMDEKVK 387
>06_03_1500 +
30602846-30603185,30603244-30603323,30603477-30603566,
30603677-30603909,30604126-30604204,30604320-30604464,
30604815-30604877,30605343-30605374,30605475-30605516,
30605599-30605712
Length = 405
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 96 ENKDGDESLESDEEVDNDENFDTKCK 173
E GD+S ++D+E+D E+ D K K
Sbjct: 251 EISSGDDSSDNDDEIDVPEDMDEKMK 276
>02_04_0421 - 22756903-22757384,22757585-22758047
Length = 314
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 150 HHYPLLHRIPNFHRHPCFLHLY 85
H++PL + P +HP F H+Y
Sbjct: 260 HNHPLYNNNPIVQKHPSFSHMY 281
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,528,825
Number of Sequences: 37544
Number of extensions: 208276
Number of successful extensions: 905
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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