Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0172
         (711 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)               34   0.13 
SB_44105| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=0.42)            33   0.23 
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)           31   0.92 
SB_58543| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_42672| Best HMM Match : DUF755 (HMM E-Value=8.1)                    31   1.2  
SB_22259| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)                      30   1.6  
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)                       30   2.1  
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)                     30   2.1  
SB_58851| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_19052| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_49533| Best HMM Match : Ldh_2 (HMM E-Value=0)                       29   3.7  
SB_1340| Best HMM Match : rve (HMM E-Value=3.1e-14)                    29   3.7  
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)                   28   6.5  
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_31956| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_27600| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_13708| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_14909| Best HMM Match : Spb1_C (HMM E-Value=0)                      28   8.6  

>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1438

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +3

Query: 105 DGDESL--ESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVY 251
           DG+E++  ES+E +D+D+N +   +EK  E+ATE   ER+K     +  VY
Sbjct: 352 DGEENVAQESEESLDDDDNKENDGEEKEEEEATE---ERRKRKGEKLPKVY 399


>SB_44105| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=0.42)
          Length = 326

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 328 SDLLVISTVILFFILIYSFVTNLKTPYTSFIIFFEVFCLSKY 203
           +D L ++ ++L   + Y FVT+L  P TS++ F     LS Y
Sbjct: 111 ADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTFLLANRLSSY 152


>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
          Length = 683

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +3

Query: 96  ENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKL 245
           E  D +E  E +E+ +N+E    K KEK  EK   +  ++ KT K I  L
Sbjct: 355 EKTDTEEKTEKEEKTENEEKPKQKEKEKEKEKRPASKLDK-KTQKMIADL 403


>SB_58543| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 530

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -3

Query: 328 SDLLVISTVILFFILIYSFVTNLKTPYTSFIIF 230
           +D L ++ ++L   + Y FVT+L  P TS++ F
Sbjct: 251 ADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTF 283


>SB_42672| Best HMM Match : DUF755 (HMM E-Value=8.1)
          Length = 159

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 87  IDAENK-DGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKL 245
           ID +N  DGD ++  D  +D D N D      + + + +    ++  +K + +L
Sbjct: 77  IDGDNNIDGDSNINGDNNIDGDSNIDGNNNNDVYDDSQQEIKSKKIVNKQLQRL 130


>SB_22259| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 625

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 KDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKL-VYG 254
           K+ DE ++SDE VDND+   T+ K     KA +   ++ + S    K+ +YG
Sbjct: 256 KNEDEPMDSDETVDNDD--VTERKSSAKRKANQIENDKDEASDRKKKVCMYG 305


>SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 383

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 90  DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATE 200
           D ++ DGD+    D++ D+D++ D  C     EKA E
Sbjct: 308 DGDDDDGDDDGVDDDDDDDDDDGDDDCVSLQIEKAEE 344


>SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)
          Length = 584

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 90  DAENKDGDESLESDEEVDNDENFDTKCKEKLSEK 191
           D+ ++D +E  ESD+E  +DE+ +    EK S+K
Sbjct: 409 DSNSEDSEEGEESDDEGSDDEDMEVSEGEKKSKK 442


>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
          Length = 581

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 90  DAENKDGDESLESDEEVDNDEN-FDTKCKEKLSEKATE 200
           + E +DGD+     E++D DE+  D K K+ + EK TE
Sbjct: 180 EEEEEDGDKDKPKIEDMDEDEDKKDKKKKKTIKEKYTE 217


>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
          Length = 1656

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 90   DAENKDGDESLESDEEVDNDENFDTKCKEKLSE 188
            D ++KD D+  + DE+ D DE+   K K ++S+
Sbjct: 1232 DDDSKDDDKDDDKDEDADEDEDHPRKNKPRVSK 1264


>SB_58851| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 51

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 120 LESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKL 245
           +++D + +N  NF+ KCK K S +    Y E++  ++ I  L
Sbjct: 1   MKADLQNENMRNFEQKCKIKFSGRRILGYLEKRAPARPINPL 42


>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1940

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 90  DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTS 227
           D E  D DE  E +EE D+D++ D K  +   + A+     +++T+
Sbjct: 151 DDEYLDDDEDEEEEEEDDDDDDDDDKNDDDDEDDASSCISSKERTN 196


>SB_19052| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 56

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 120 LESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKL 245
           +++D + +N  NF+ KCK K S +    Y E++  ++ I  L
Sbjct: 1   MKADLQNENMRNFEQKCKIKFSGRRILGYLEKRAPARPINPL 42


>SB_49533| Best HMM Match : Ldh_2 (HMM E-Value=0)
          Length = 883

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +3

Query: 90  DAENKDGDESLESDEEVDNDENFDTK----CKEKLSEKATEAYF 209
           D  N D D+ + +D+E D+D++ D       ++K  +  T AY+
Sbjct: 838 DENNDDDDDEIPTDDEADDDDDSDDNGIHDRRKKSKQPGTPAYY 881


>SB_1340| Best HMM Match : rve (HMM E-Value=3.1e-14)
          Length = 825

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 159 DTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVLRLVTKL*IRMKK 296
           D + K K  +  T  Y  RQKTS + +K +  VL  + K  +R+K+
Sbjct: 130 DPQAKPKYFKPRTLEYARRQKTSADHLKSLTEVLSRLDKAGVRLKR 175


>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 320

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 150 ENFDTKCKEKLSEKATEAY 206
           EN+ TK  EK S KATE Y
Sbjct: 247 ENYSTKATEKYSTKATEKY 265



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 150 ENFDTKCKEKLSEKATEAY 206
           EN+ TK  EK S KATE Y
Sbjct: 121 ENYSTKAAEKYSTKATENY 139



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = +3

Query: 150 ENFDTKCKEKLSEKATEAYFERQKTSKN 233
           ENF TK  E  S KATE Y    K S+N
Sbjct: 207 ENFSTKATENYSTKATEKY--STKASEN 232


>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
          Length = 226

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
 Frame = +3

Query: 90  DAENKDGDESLESDEEVDN-DENFDTKCKEKLSEKATEA------YFERQKTSKNI 236
           D  N   DE+  +++E +N +++ D  C +KLS++   A      Y  R KT  NI
Sbjct: 121 DENNNSNDENNNNNDENNNSNDDDDDMCADKLSKEVCAAKVNIDGYCRRHKTYMNI 176


>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2835

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 87  IDAENKDGDESLESDEEVDNDENFD 161
           +D +N   D+  +SDE+ D+D+N D
Sbjct: 55  VDDDNDGNDDDDDSDEDYDDDDNDD 79


>SB_31956| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 319

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 90  DAENKDGDESLESDEEVDNDEN 155
           D+E  D D+S  +D++VD+D N
Sbjct: 288 DSEGDDDDDSFAADDDVDDDVN 309


>SB_27600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 893

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 123 ESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNI-MKLVYGVLR 263
           ++ E+ D D ++D +C  +   KATE +      S+   +K ++G+ R
Sbjct: 113 DTSEDGDEDRDWDEECATRRILKATEGHLTLTSDSEGCNLKSLFGIRR 160


>SB_13708| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 165

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 87  IDAENKDGDESLESDEEVDNDENFDTKCKEKLSE 188
           + + + D D+  + D++ D+DE   T+C+  LSE
Sbjct: 124 VSSYDDDDDDDDDDDDDDDDDEQPITECQRDLSE 157


>SB_14909| Best HMM Match : Spb1_C (HMM E-Value=0)
          Length = 437

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 84  GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMK 242
           G D EN D +  +ES +  DN E+ DT+ KE +         E++  S    K
Sbjct: 78  GSDVENDDNE--MESSDGEDNQESVDTQ-KENVENPLLVTLEEKESASAKTSK 127


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,225,567
Number of Sequences: 59808
Number of extensions: 271633
Number of successful extensions: 2112
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2064
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)