Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0172
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 36 0.038
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 36 0.038
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 32 0.35
Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical pr... 31 0.61
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 31 0.81
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 31 0.81
Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 3.3
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 29 3.3
U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with... 29 3.3
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 29 3.3
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 29 3.3
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 4.3
AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric ... 29 4.3
AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric ... 29 4.3
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 29 4.3
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 28 5.7
AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical ... 28 5.7
AF014939-1|AAB63926.1| 578|Caenorhabditis elegans Hypothetical ... 28 5.7
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z19157-5|CAE18055.2| 177|Caenorhabditis elegans Hypothetical pr... 28 7.6
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 28 7.6
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 90 DAENKDGDESLESDEEV-DNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVLRL 266
D N+D D E +EE+ +N+E++D E L EA E K +N++ + GV
Sbjct: 267 DLNNEDEDSENEKEEEIEENEEDYDQSDIEMLDSDEEEAGEEAAKNRRNLLLGLIGVQED 326
Query: 267 VTKL*IRMKKR 299
+ + KKR
Sbjct: 327 KNRPSLAPKKR 337
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 90 DAENKDGDESLESDEEV-DNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVLRL 266
D N+D D E +EE+ +N+E++D E L EA E K +N++ + GV
Sbjct: 267 DLNNEDEDSENEKEEEIEENEEDYDQSDIEMLDSDEEEAGEEAAKNRRNLLLGLIGVQED 326
Query: 267 VTKL*IRMKKR 299
+ + KKR
Sbjct: 327 KNRPSLAPKKR 337
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYG 254
+ E++D DE E V +E D L+ KA Y E Q N MKLVYG
Sbjct: 353 EEEDEDEDEDEEDVGVVKKEE--DQNEWSNLASKAVAQYRESQNVKVNWMKLVYG 405
>Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical
protein W04G3.5 protein.
Length = 353
Score = 31.5 bits (68), Expect = 0.61
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +3
Query: 138 VDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVLRLVTKL*IRMKKRITVLMT 317
V N N +T K S + + Q SKN+ V +L L+ M K ITV+M
Sbjct: 39 VYNKTNRETSVDIKQSVRGKHVFI-LQSGSKNVNNDVMELLVLIYACKTSMSKTITVIMP 97
Query: 318 RRSEAYSRKLQILRRKNIKKK 380
YS++ ++LRR +I K
Sbjct: 98 YL--PYSKQCRMLRRSSIAMK 116
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 31.1 bits (67), Expect = 0.81
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDE---NFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVL 260
DAE+ DE +E +EE+D++E + +E++ ++A E ++ S+ + K L
Sbjct: 584 DAESDADDEEIEDEEEMDDEEEEIEISDEEEEEIDDEAEEEAVVEEEASEAVEK--DPKL 641
Query: 261 RLVTKL*IRMKKRITVLMTRRSEAYSRKLQILRRKNIKKK 380
+ M + +T + +AY K Q++ K +KK+
Sbjct: 642 KASKN---SMDRIMTQEDFKNIKAYQLKKQLIGEKRLKKQ 678
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 31.1 bits (67), Expect = 0.81
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDE---NFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVL 260
DAE+ DE +E +EE+D++E + +E++ ++A E ++ S+ + K L
Sbjct: 584 DAESDADDEEIEDEEEMDDEEEEIEISDEEEEEIDDEAEEEAVVEEEASEAVEK--DPKL 641
Query: 261 RLVTKL*IRMKKRITVLMTRRSEAYSRKLQILRRKNIKKK 380
+ M + +T + +AY K Q++ K +KK+
Sbjct: 642 KASKN---SMDRIMTQEDFKNIKAYQLKKQLIGEKRLKKQ 678
>Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical
protein ZC443.4 protein.
Length = 389
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +3
Query: 90 DAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVL 260
+ EN + DE+LE DE+ ++ +C++ SE F+ +++ + + +L
Sbjct: 287 EEENVEDDENLEDDEDDRTEDQSSIRCRQSESENINFPDFQSCNITEDQKQAIMRIL 343
>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical protein
ZK970.6 protein.
Length = 1122
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 147 DENFDTKCKEKLSEKATEAYFERQKTSKNIM 239
DEN+ + KE L ++A Y ERQ++ K+ M
Sbjct: 1086 DENWPPQMKEDLKKRAVTPYPERQRSGKSKM 1116
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 87 IDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFE 212
+ A++ DGD + +DE NDE+ + +E +S K E + E
Sbjct: 641 VQAQDTDGDAQV-ADENAQNDEDSTSPKEESVSPKPDETHEE 681
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/100 (21%), Positives = 50/100 (50%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVLR 263
G + + DG+E +E+ ++D N C EKL +++Y N++K V +
Sbjct: 1532 GAASSSTDGEEL---EEQQNDDRNRVRACCEKLETNMSQSY-------PNLVKDVRQFVA 1581
Query: 264 LVTKL*IRMKKRITVLMTRRSEAYSRKLQILRRKNIKKKN 383
+ ++ + +++ +V+M ++L ++R +N K ++
Sbjct: 1582 ELERINLLNEEKWSVVMGTMEHEMEKRLSLIRTENAKTES 1621
>U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform b
protein.
Length = 2019
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/100 (21%), Positives = 50/100 (50%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVLR 263
G + + DG+E +E+ ++D N C EKL +++Y N++K V +
Sbjct: 1532 GAASSSTDGEEL---EEQQNDDRNRVRACCEKLETNMSQSY-------PNLVKDVRQFVA 1581
Query: 264 LVTKL*IRMKKRITVLMTRRSEAYSRKLQILRRKNIKKKN 383
+ ++ + +++ +V+M ++L ++R +N K ++
Sbjct: 1582 ELERINLLNEEKWSVVMGTMEHEMEKRLSLIRTENAKTES 1621
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-mediated
mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/100 (21%), Positives = 50/100 (50%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLVYGVLR 263
G + + DG+E +E+ ++D N C EKL +++Y N++K V +
Sbjct: 1532 GAASSSTDGEEL---EEQQNDDRNRVRACCEKLETNMSQSY-------PNLVKDVRQFVA 1581
Query: 264 LVTKL*IRMKKRITVLMTRRSEAYSRKLQILRRKNIKKKN 383
+ ++ + +++ +V+M ++L ++R +N K ++
Sbjct: 1582 ELERINLLNEEKWSVVMGTMEHEMEKRLSLIRTENAKTES 1621
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 138 VDNDENFDTKCKEKLSEKATEAYFERQKTSKN 233
V D +F K + L +A +A FE +KTS+N
Sbjct: 275 VAQDNHFQNKSRAGLVAEACKAMFENEKTSRN 306
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFER 215
G DAE DGD+ + D+ D+DE K + K+ + E+
Sbjct: 280 GNDAEKDDGDDDDDDDDGNDDDEEDGKNKKTSVEAKSDKVVEEK 323
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFER 215
G DAE DGD+ + D+ D+DE K + K+ + E+
Sbjct: 280 GNDAEKDDGDDDDDDDDGNDDDEEDGKNKKTSVEAKSDKVVEEK 323
>AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 90 DAENKDGDESLESDEE--VDNDENFDTKCKEKLSEKATEAYFE--RQKTSKNIMKLVY 251
D K+ ++S +SDEE DN+EN K +EK EK + E R + +VY
Sbjct: 462 DVAVKEEEQSDKSDEENDGDNEENVSKKKEEKKKEKKAKEVKEVGRMDAMSVLYNIVY 519
>AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform b protein.
Length = 1758
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 90 DAENKDGDESLESDEE--VDNDENFDTKCKEKLSEKATEAYFE--RQKTSKNIMKLVY 251
D K+ ++S +SDEE DN+EN K +EK EK + E R + +VY
Sbjct: 462 DVAVKEEEQSDKSDEENDGDNEENVSKKKEEKKKEKKAKEVKEVGRMDAMSVLYNIVY 519
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 87 IDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFE 212
++ N+ DES E DEE ++DE D + E+ E + Y E
Sbjct: 231 VNENNESSDES-EDDEEDEDDEEDDDEDDEEEEEDSESGYEE 271
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 206 F*ETKNFKKYYETCVWSFEIGHKTIDQNEEKDN-STDDEEIGGLFKKVTD 352
F ET KKYYE+ + + ++G T +EE GG FK++ D
Sbjct: 1326 FIETMPMKKYYESAMETLDMGTFRFGPLMSLSMVGTKNEEAGGNFKEMLD 1375
>AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical
protein F56E10.1 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 84 GIDAENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMKLV 248
G D+E +D ++S E + E D+D + DT+ + E E T K++
Sbjct: 52 GEDSEEEDEEDSDEEESEDDSDSSVDTESVNSVWSNVDEENGEEITTEAAEAKII 106
>AF014939-1|AAB63926.1| 578|Caenorhabditis elegans Hypothetical
protein ZC132.3a protein.
Length = 578
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 322 LLVISTVILFFILIYSFVTNLKTPYTSFIIFFEVFCLSKY 203
L V I + I+I FVT+ S ++ FEVFC K+
Sbjct: 526 LFVAGNFINYEIIISMFVTSDLFLVPSMVLIFEVFCRPKH 565
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +3
Query: 96 ENKDGDESLESDEEVDNDENFDTKCKEKLSEKA 194
E K+ ++S++ + +N +N + + KEK+SEK+
Sbjct: 468 EEKEKEDSIKDEVAEENSDNDNDEEKEKVSEKS 500
>Z19157-5|CAE18055.2| 177|Caenorhabditis elegans Hypothetical
protein ZC84.7 protein.
Length = 177
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 322 LLVISTVILFFILIYSFVTNLKTPYT-SFIIFFEVFCLSKYASVAFS 185
L+++ +I I+ + L PY S+++FF FC +++A + S
Sbjct: 37 LIIVENIIFLSIVSKRSIPLLLIPYILSWVLFFLGFCFARFAYLIHS 83
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 96 ENKDGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSK 230
E K+ + + DE+ + +E+ D K K+K K +E +++K K
Sbjct: 76 EKKNKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEEEDKKKDKK 120
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 105 DGDESLESDEEVDNDENFDTKCKEKLSEKATEAYFERQKTSKNIMK 242
D DES S++EVDN +N T+ +L + +T K KN +K
Sbjct: 182 DADESKWSEKEVDNLKNALTRFAHELDQISTCVANRTTKHIKNDIK 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,541,931
Number of Sequences: 27780
Number of extensions: 214772
Number of successful extensions: 1316
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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