Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0169
(484 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 149 3e-37
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 149 3e-37
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 149 3e-37
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 85 4e-18
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 84 1e-17
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 58 7e-10
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.010
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 33 0.017
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 33 0.017
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.017
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 31 0.069
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 31 0.091
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 31 0.12
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.12
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.16
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.28
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 1.5
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 27 1.5
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.0
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 2.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 2.6
SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit |Schizosacc... 26 2.6
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 26 2.6
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 26 3.4
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.5
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 6.0
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 7.9
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 149 bits (360), Expect = 3e-37
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = +2
Query: 32 MGNEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MG EK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 212 DKLKAERELGITIDM 256
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
Score = 136 bits (328), Expect = 2e-33
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTRE 135
Query: 436 HALLAFTLGV 465
HALLA+TLGV
Sbjct: 136 HALLAYTLGV 145
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 149 bits (360), Expect = 3e-37
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = +2
Query: 32 MGNEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MG EK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 212 DKLKAERELGITIDM 256
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
Score = 136 bits (329), Expect = 2e-33
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTRE 135
Query: 436 HALLAFTLGV 465
HALLA+TLGV
Sbjct: 136 HALLAYTLGV 145
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 149 bits (360), Expect = 3e-37
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = +2
Query: 32 MGNEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MG EK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 212 DKLKAERELGITIDM 256
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
Score = 136 bits (328), Expect = 2e-33
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTRE 135
Query: 436 HALLAFTLGV 465
HALLA+TLGV
Sbjct: 136 HALLAYTLGV 145
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 85.4 bits (202), Expect = 4e-18
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +2
Query: 44 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 223
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 224 AERELGITIDM 256
ERE G T+++
Sbjct: 296 EEREKGKTVEV 306
Score = 83.4 bits (197), Expect = 2e-17
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 447
FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+L
Sbjct: 311 FETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVL 370
Query: 448 AFTLGV 465
A T G+
Sbjct: 371 ARTQGI 376
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 83.8 bits (198), Expect = 1e-17
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +2
Query: 29 KMGNEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 208
+ N K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+
Sbjct: 170 EQSNPKPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWL 229
Query: 209 LDKLKAERELGITIDMLS 262
LD + ER G+T+D+ S
Sbjct: 230 LDTTEEERARGVTMDVAS 247
Score = 76.2 bits (179), Expect = 2e-15
Identities = 37/66 (56%), Positives = 42/66 (63%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 447
FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L
Sbjct: 250 FESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYL 309
Query: 448 AFTLGV 465
LG+
Sbjct: 310 LRALGI 315
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 58.0 bits (134), Expect = 7e-10
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +1
Query: 265 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 444
++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 445 LAFTLGV 465
LA +GV
Sbjct: 163 LARQVGV 169
Score = 36.3 bits (80), Expect = 0.002
Identities = 26/70 (37%), Positives = 34/70 (48%)
Frame = +2
Query: 41 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 220
+K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 50 KKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDKA 94
Query: 221 KAERELGITI 250
E+ GITI
Sbjct: 95 PEEKARGITI 104
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.010
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 438
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 33.9 bits (74), Expect = 0.013
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +2
Query: 56 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 235
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 236 LGITI 250
GITI
Sbjct: 111 KGITI 115
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 33.5 bits (73), Expect = 0.017
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 32 MGNEKTHINIVVIGHVDSGKSTTTGHLIYKCG 127
MG N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 0.85
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 378
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 33.5 bits (73), Expect = 0.017
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 32 MGNEKTHINIVVIGHVDSGKSTTTGHLIYKCG 127
MG N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 0.85
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 378
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.017
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 31.5 bits (68), Expect = 0.069
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 56 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 235
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGD----TVMDYLPAERQ 76
Query: 236 LGITID 253
GITI+
Sbjct: 77 RGITIN 82
Score = 27.9 bits (59), Expect = 0.85
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 289 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ +ID PGH DF + + D AV I+ G
Sbjct: 95 INLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 31.1 bits (67), Expect = 0.091
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 286 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 381
+V+ +D PGH + M+ G + D A+L++A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
Score = 25.4 bits (53), Expect = 4.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 26 PKMGNEKTHINIVVIGHVDSGKST 97
P + + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 30.7 bits (66), Expect = 0.12
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 306 SINDGNIVLASFELPESISIVIPSSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 127
S++ + L S+ P S+S + + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.12
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 259 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
Score = 26.2 bits (55), Expect = 2.6
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +2
Query: 56 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 235
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 236 LGITI 250
GIT+
Sbjct: 104 RGITV 108
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.16
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
Score = 25.0 bits (52), Expect = 6.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 38 NEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKR 142
N++ N ++ HVD GK+T L+ G I +
Sbjct: 15 NQENIRNFTLLAHVDHGKTTLADSLLASNGIISSK 49
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.28
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLIV 378
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 27.1 bits (57), Expect = 1.5
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -3
Query: 272 SNFQRAYRL*YQAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWW 93
SN +R R + V +PK I I++ F P S S C+Y S D W
Sbjct: 13 SNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWR 72
Query: 92 T 90
T
Sbjct: 73 T 73
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 1.5
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -2
Query: 372 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESISIVIPSSRSAFSLSNTQAYL 193
EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 192 KDPLPI 175
K LPI
Sbjct: 62 KALLPI 67
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 2.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 298 IDAPGHRDFIKNMITGTSQADCAVLIV 378
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 2.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 258 SISIVIPSSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 142
+IS+ +P+ FSL+ ++ K LPI W S + S V
Sbjct: 408 NISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 2.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 279 ASFELPESISIVIPSSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSI 130
A+ +LP S S P+S S + L DP +S A + + V +SI
Sbjct: 110 ATSQLPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSI 159
>SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 940
Score = 26.2 bits (55), Expect = 2.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 336 HVLDEISVSRSINDGNIVLASFELPESISIVIPSSRSAFS 217
+ +D+ SV R +N + + ELPE ++ + R AFS
Sbjct: 607 YTIDDDSVERIMNCIRAIYSFEELPEFQTVFLDDMRKAFS 646
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 26.2 bits (55), Expect = 2.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 333 VLDEISVSRSINDGNIVLASFELPESISIVIPSSRSAFSLSN 208
V D + SIN N++ A + +P +PSS +F L N
Sbjct: 87 VYDTLQELMSINSINMLYAFYYMPSGDEEKLPSSWKSFLLEN 128
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 25.8 bits (54), Expect = 3.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 212 DKLKAERELGITIDMLSGSSKLASTMLPS 298
D +KA RELG+ ++ G L ++ +PS
Sbjct: 66 DMIKAARELGLNAYVIPGEKLLDASEIPS 94
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 25.4 bits (53), Expect = 4.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 342 CDHVLDEISVSRSINDGNIVLASFELPESI 253
CDH+L IS SR G + FEL +I
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFELAVTI 52
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 6.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 173 PGPPSRTSRWYVCQYHHIC 117
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 7.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 289 VTIIDAPGHRDFIKN 333
+T+ID PG DFI N
Sbjct: 89 LTVIDTPGFGDFINN 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,816,352
Number of Sequences: 5004
Number of extensions: 35196
Number of successful extensions: 154
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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