Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0168
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.2  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   1.6  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   2.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.8  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 390 HLLAYNNGSAYWGSDNGFR 446
           H   +N+G+ +W S +GF+
Sbjct: 166 HFNVHNSGTHFWHSHSGFQ 184


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +1

Query: 169 CTFVIARSLKQNG*GAPHRYTNKHDSLRIVHIVH 270
           C F++A S  +N      +YTNK+D++ +  I++
Sbjct: 10  CAFLVAVSAAEN------KYTNKYDNVDVDKILN 37


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +1

Query: 220 HRYTNKHDSLRIVHIVHRRER 282
           H+YT K+D++ + ++V + ER
Sbjct: 24  HKYTTKYDNIDLENVV-KNER 43


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 165 TLYVCHCP 188
           T Y CHCP
Sbjct: 81  THYTCHCP 88


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +1

Query: 241 DSLRIVHIVHRRERGQRETSSVFFQIERGFFSILS*NSCFDPVNISLLNSIY 396
           + LRI+H V  R+  +     V     R FF +       D + ++ LN ++
Sbjct: 200 NELRILHGVEIRDYPKFPYRGVMIDTARNFFPVDLIRKVVDGMAMAKLNVLH 251


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 313 QIERGFFSILS*NSCFDPVNISLLN 387
           +I++  F     NSC +PV   + N
Sbjct: 311 RIQKALFLFACTNSCMNPVVYGVFN 335


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 313 QIERGFFSILS*NSCFDPVNISLLN 387
           +I++  F     NSC +PV   + N
Sbjct: 311 RIQKALFLFACTNSCMNPVVYGVFN 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,125
Number of Sequences: 336
Number of extensions: 2109
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)