Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0168
         (525 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF402000-1|AAM73764.1| 2542|Homo sapiens talin 2 protein.              34   0.35 

>AF402000-1|AAM73764.1| 2542|Homo sapiens talin 2 protein.
          Length = 2542

 Score = 33.9 bits (74), Expect = 0.35
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 156 VQLTLYVC--HCPIVKTKWVRSPTPIYE*TRFVKDRTHCSQTGARPARNIF 302
           V L+L +C  HC +VKT      T +Y+  R +++R   +QTG      +F
Sbjct: 2   VALSLKICVRHCNVVKTMQFEPSTAVYDACRVIRERVPEAQTGQASDYGLF 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,137,495
Number of Sequences: 237096
Number of extensions: 1168014
Number of successful extensions: 1541
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)