Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0167
(486 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 130 1e-29
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 110 1e-23
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 100 2e-20
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 99 5e-20
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 99 6e-20
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 97 1e-19
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 93 4e-18
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 90 2e-17
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 86 5e-16
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 83 2e-15
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 80 3e-14
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 76 5e-13
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 72 8e-12
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 72 8e-12
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 71 1e-11
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 70 2e-11
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 65 7e-10
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 60 3e-08
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 58 8e-08
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 58 1e-07
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 57 2e-07
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 56 4e-07
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 55 1e-06
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 54 2e-06
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 53 3e-06
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 51 2e-05
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 50 2e-05
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 50 3e-05
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 48 9e-05
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 48 9e-05
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 48 1e-04
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 47 2e-04
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 47 2e-04
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 45 8e-04
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 44 0.001
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 44 0.002
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.010
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 39 0.052
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 39 0.069
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.091
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 38 0.12
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 37 0.21
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.21
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.37
UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2; Clos... 35 0.85
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.1
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 35 1.1
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 1.5
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.0
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 2.6
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 33 2.6
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 3.4
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 4.5
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 4.5
UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3; ... 32 6.0
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 6.0
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 32 6.0
UniRef50_UPI00015A3C61 Cluster: vomeronasal 2 receptor 635; n=26... 32 7.9
UniRef50_UPI0000F2B3FB Cluster: PREDICTED: hypothetical protein;... 32 7.9
UniRef50_Q9W0Q1 Cluster: CG17090-PA, isoform A; n=6; Eumetazoa|R... 32 7.9
UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA... 32 7.9
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 130 bits (315), Expect = 1e-29
Identities = 59/72 (81%), Positives = 66/72 (91%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
+KGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVV S Q
Sbjct: 79 IKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQ 138
Query: 434 KDELIIEGNSLE 469
KDELI+EGN +E
Sbjct: 139 KDELIVEGNDIE 150
Score = 109 bits (262), Expect = 3e-23
Identities = 51/80 (63%), Positives = 64/80 (80%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 200
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 201 SKKELAAVRTVCSXVENMLK 260
+KKELAAVRTVCS +ENM+K
Sbjct: 61 TKKELAAVRTVCSHIENMIK 80
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 110 bits (265), Expect = 1e-23
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
+KGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S Q
Sbjct: 81 IKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQ 140
Query: 434 KDELIIEGNSLE 469
KDELI+EGN +E
Sbjct: 141 KDELILEGNDIE 152
Score = 92.3 bits (219), Expect = 5e-18
Identities = 40/82 (48%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKW 194
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 195 FGSKKELAAVRTVCSXVENMLK 260
+G++KELA VRT+CS V+NM+K
Sbjct: 61 WGNRKELATVRTICSHVQNMIK 82
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 100 bits (240), Expect = 2e-20
Identities = 44/72 (61%), Positives = 56/72 (77%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
+ GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K
Sbjct: 80 ITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKV 139
Query: 434 KDELIIEGNSLE 469
KDEL+++GN +E
Sbjct: 140 KDELVLDGNDIE 151
Score = 87.8 bits (208), Expect = 1e-16
Identities = 38/80 (47%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 197
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 198 GSKKELAAVRTVCSXVENML 257
G+++ +AA+RT S V+N++
Sbjct: 61 GTRRTMAAIRTAISHVQNLI 80
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 99.1 bits (236), Expect = 5e-20
Identities = 40/72 (55%), Positives = 55/72 (76%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
+ GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K
Sbjct: 97 ITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKA 156
Query: 434 KDELIIEGNSLE 469
KDE+++ GNSLE
Sbjct: 157 KDEIVLTGNSLE 168
Score = 72.9 bits (171), Expect = 3e-12
Identities = 30/64 (46%), Positives = 46/64 (71%)
Frame = +3
Query: 66 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSXV 245
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 246 ENML 257
ENM+
Sbjct: 94 ENMI 97
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 98.7 bits (235), Expect = 6e-20
Identities = 45/71 (63%), Positives = 55/71 (77%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQKD 439
GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KD
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKD 140
Query: 440 ELIIEGNSLED 472
E+I+EGNSLE+
Sbjct: 141 EIILEGNSLEN 151
Score = 66.5 bits (155), Expect = 3e-10
Identities = 30/78 (38%), Positives = 50/78 (64%)
Frame = +3
Query: 24 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 203
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 204 KKELAAVRTVCSXVENML 257
+K A +R+V S + NM+
Sbjct: 62 RKHNACIRSVYSIINNMI 79
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 97.5 bits (232), Expect = 1e-19
Identities = 42/80 (52%), Positives = 59/80 (73%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 200
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 201 SKKELAAVRTVCSXVENMLK 260
+KE+AA+RTVCS ++NM+K
Sbjct: 61 VRKEIAAIRTVCSHIQNMIK 80
Score = 73.3 bits (172), Expect = 3e-12
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 397
+KGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 79 IKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 92.7 bits (220), Expect = 4e-18
Identities = 40/72 (55%), Positives = 51/72 (70%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
+KGVT GFQYKMRAVYAHFPIN + EIRNFLGEK +R + M GVT+ Q
Sbjct: 141 IKGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQ 200
Query: 434 KDELIIEGNSLE 469
KD++++EGN ++
Sbjct: 201 KDQVLVEGNDID 212
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 131
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 90.2 bits (214), Expect = 2e-17
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSP 427
+ GVTKG++YKMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S
Sbjct: 79 ITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFST 138
Query: 428 KQKDELIIEGNSLED 472
KDE+++ GNS+ED
Sbjct: 139 NVKDEIVLSGNSVED 153
Score = 81.8 bits (193), Expect = 7e-15
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 200
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 201 SKKELAAVRTVCSXVENML 257
+K +AA+RTV S V+NM+
Sbjct: 61 GRKHVAALRTVKSLVDNMI 79
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 85.8 bits (203), Expect = 5e-16
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = +2
Query: 257 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQK 436
KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 437 DELIIEGNSLED 472
DELI+ G S+ED
Sbjct: 138 DELILRGISIED 149
Score = 61.7 bits (143), Expect = 9e-09
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +3
Query: 30 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 209
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 210 ELAAVRTVCSXVENMLK 260
A RT+CS +ENM K
Sbjct: 62 RNALPRTICSHIENMFK 78
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 83.4 bits (197), Expect = 2e-15
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 194
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 195 FGSKKELAAVRTVCSXVENMLK 260
+G++KELA V T+CS V+N +K
Sbjct: 61 WGNRKELATVHTICSPVQNTIK 82
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 79.8 bits (188), Expect = 3e-14
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Frame = +2
Query: 218 RREDSLF-TXREHVK----GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 382
RR+ ++ T H+K GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK
Sbjct: 72 RRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRT 131
Query: 383 RRVKMAPGVTVVXSPKQKDELIIEGNSLE 469
R ++M GV V KDE+ +EGN +E
Sbjct: 132 RHIEMYDGVVV--KKLGKDEICLEGNDVE 158
Score = 56.0 bits (129), Expect = 4e-07
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Frame = +3
Query: 42 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 194
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 195 FGSKKELAAVRTVCSXVENML 257
+G++++ A VRT+ S ++NM+
Sbjct: 69 YGNRRDSAVVRTIASHIKNMI 89
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 75.8 bits (178), Expect = 5e-13
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
+ GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +
Sbjct: 80 IVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAK 139
Query: 434 KDELIIEGNSL 466
KDE+ + G+ L
Sbjct: 140 KDEISVFGSDL 150
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 197
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 198 GSKKELAAVRTVCSXVENML 257
KK+LA + T+ S + NM+
Sbjct: 61 AGKKQLAKLNTIASHITNMI 80
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 71.7 bits (168), Expect = 8e-12
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = +3
Query: 21 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 188
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 189 KWFGSKKELAAVRTVCSXVENML 257
WFG K A +RTVCS +ENM+
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMI 142
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 367
+ GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 142 ITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 71.7 bits (168), Expect = 8e-12
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +2
Query: 203 QKGACRREDSLFTXREHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 382
+K C+ R ++GVT G+++KM YAHFPI +EI+NFLGEK I
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKII 130
Query: 383 RRVKMAPGVTVVXS-PKQKDELIIEGNSLED 472
R +K PGVT+ + ++K+ L ++GN L +
Sbjct: 131 RTIKCLPGVTITRNEAEEKNVLTLQGNDLNN 161
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 173
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 174 LLKVEKWFGSKKELAAVRTVCSXVENMLKE*LKASNTRCVLCMLTSPLTVS 326
+ V W +K+ V +V S + NM++ + VL P+ ++
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIIN 111
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 70.9 bits (166), Expect = 1e-11
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2
Query: 245 REHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXS 424
R +K VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V
Sbjct: 95 RNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRL 153
Query: 425 PKQKDELIIEGNSLED 472
++KD ++IEG SL D
Sbjct: 154 DERKDTIVIEGPSLSD 169
Score = 39.9 bits (89), Expect = 0.030
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 179
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 180 KVEKWFGSKKELAAVRTVCSXVENMLK 260
++ W G +K +A TV S + N +K
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIK 99
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 70.1 bits (164), Expect = 2e-11
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +2
Query: 245 REHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXS 424
R +KGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV
Sbjct: 76 RNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV--- 130
Query: 425 PKQKDELIIEG 457
+ E+I+EG
Sbjct: 131 KVRGQEIIVEG 141
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +3
Query: 42 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 221
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 222 VRTVCSXVENMLK 260
RT + + NM+K
Sbjct: 68 ARTFAAHIRNMIK 80
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 65.3 bits (152), Expect = 7e-10
Identities = 29/54 (53%), Positives = 42/54 (77%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 415
+KGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV
Sbjct: 79 IKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV 130
Score = 55.2 bits (127), Expect = 7e-07
Identities = 31/94 (32%), Positives = 54/94 (57%)
Frame = +3
Query: 42 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 221
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 222 VRTVCSXVENMLKE*LKASNTRCVLCMLTSPLTV 323
VRT + + NM+K + R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +2
Query: 224 EDSLFTXREHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 403
++ L + EH +G GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++
Sbjct: 20 QNHLQSCSEHDQG---GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRT 76
Query: 404 GVTVVXSPKQKDELI 448
V S QK+EL+
Sbjct: 77 SVAFYASQAQKNELM 91
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 58.4 bits (135), Expect = 8e-08
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQKD 439
GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD
Sbjct: 81 GVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKVKI---EKD 135
Query: 440 ELIIEGNSLE 469
++I+EG L+
Sbjct: 136 DVIVEGIDLD 145
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 197
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 198 GSKKELAAVRTVCSXVENML 257
+KK+ A V T+ S + NM+
Sbjct: 60 ATKKDYALVGTIASIINNMI 79
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 57.6 bits (133), Expect = 1e-07
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
++GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV
Sbjct: 75 IRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVKIG--- 129
Query: 434 KDELIIEG 457
DE+ I G
Sbjct: 130 NDEVTITG 137
Score = 37.9 bits (84), Expect = 0.12
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +3
Query: 42 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 221
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 222 VRTVCSXVENMLK 260
T+ + +NM++
Sbjct: 64 TGTLEAHAKNMIR 76
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
+ GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S +
Sbjct: 97 ITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ- 153
Query: 434 KDELIIEGNSLED 472
++ + G +E+
Sbjct: 154 --DIYVRGIDIEE 164
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 56.0 bits (129), Expect = 4e-07
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPK- 430
+ GVT G++YKM VY+HFPI +E + F+G K + V GV + +
Sbjct: 87 ITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESV 146
Query: 431 QKDELIIEGNSLED 472
KDE+ IEG +LED
Sbjct: 147 AKDEINIEGANLED 160
Score = 38.7 bits (86), Expect = 0.069
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +3
Query: 24 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 182
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 183 VEKWFGSKKELAAVRTVCSXVENML 257
WFG++K LA + T+ V+NM+
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMI 87
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 54.8 bits (126), Expect = 1e-06
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 194
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 195 FGSKKELAAVRTVCSXVENMLK 260
+ K LA T+ S V+NM+K
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIK 75
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQKD 439
GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K+
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKE 140
Query: 440 ELIIEG 457
+++IEG
Sbjct: 141 DIVIEG 146
Score = 35.9 bits (79), Expect = 0.49
Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 185
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 186 EKWFGSKKELAAVRTVCSXVENM 254
E + K+E A + T ++NM
Sbjct: 60 EVFKARKREYAILGTYKGILKNM 82
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +2
Query: 218 RREDSLFTXREHVK----GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 385
R++ L++ H+K G G++Y ++ + HFPI+ V G+ + ++ N +GEK IR
Sbjct: 66 RKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIR 123
Query: 386 RVKMAPGVTVVXSPKQKDELIIEGNSL 466
R K+ PGV V + +++++EG+ +
Sbjct: 124 RAKILPGVKVTV---KGEDIVVEGSDI 147
Score = 41.5 bits (93), Expect = 0.010
Identities = 20/80 (25%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 197
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 198 GSKKELAAVRTVCSXVENML 257
+++ A + ++ + ++NM+
Sbjct: 63 ADRRKKALLYSIIAHIKNMI 82
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 50.8 bits (116), Expect = 2e-05
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Frame = +2
Query: 179 EG*EMVRIQKGACRREDSLFTXREHVK----GVTKGFQYKMRAVYAHFPINCVTTEGNSI 346
EG +V + ++ + T H+K GV++GF+ KM VYAHFP+ V EG ++
Sbjct: 48 EGEVVVDAESSRKEQKAMVGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTL 106
Query: 347 IEIRNFLGEKYIRRVKMAPGVTVVXSPKQKDELIIEGNSLED 472
+ I NFLGEK R K+ V S +E+++ G + ED
Sbjct: 107 V-IGNFLGEKKPRIAKILGETKVKVS---GNEIVVSGINKED 144
Score = 39.9 bits (89), Expect = 0.030
Identities = 19/70 (27%), Positives = 41/70 (58%)
Frame = +3
Query: 48 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 227
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 228 TVCSXVENML 257
T S ++N++
Sbjct: 68 TFASHLKNLI 77
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 415
++GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V
Sbjct: 78 IEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV 129
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 50.0 bits (114), Expect = 3e-05
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Frame = +2
Query: 212 ACRREDSLF-TXREHVKGVTKGFQ----YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 376
A RRE L T R H+K + +G Q Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 59 ATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
Query: 377 --YIRRVKMAPGVTV-VXSPKQKDELIIEGNSLE 469
I+ + V V + K + E+++E E
Sbjct: 117 APIIKELPYLDKVKVKIEQNKDETEIVVESPDKE 150
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/101 (24%), Positives = 52/101 (51%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 200
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 201 SKKELAAVRTVCSXVENMLKE*LKASNTRCVLCMLTSPLTV 323
+++E + T S ++NML+ R +C P+ V
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 48.4 bits (110), Expect = 9e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQKD 439
GV+KGF Y ++ VY+HFPI+ + + +EI N G K I + V V + K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKK 142
Query: 440 ELIIEGNSLE 469
E+I+ +E
Sbjct: 143 EIILLSKDIE 152
Score = 42.3 bits (95), Expect = 0.006
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 194
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 195 FGSKKELAAVRTVCSXVENML 257
+ +K A VRT+ S + NM+
Sbjct: 61 YNNKSSSAIVRTITSIIYNMI 81
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 48.4 bits (110), Expect = 9e-05
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +2
Query: 245 REHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXS 424
R +GV G+ K++ VYAHFPI + +G ++I + NF GE+ R+ K+ G VV
Sbjct: 60 RNLCEGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAKIVGGTKVV-- 115
Query: 425 PKQKDELIIEGNSLED 472
+ +++I+ G+ L D
Sbjct: 116 -SKGEDVIVTGHVLTD 130
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 48.0 bits (109), Expect = 1e-04
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
VKG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T V +
Sbjct: 78 VKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQV--SVK 132
Query: 434 KDELIIEGNSLED 472
D L + G S +D
Sbjct: 133 GDRLFLNGPSKKD 145
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 47.2 bits (107), Expect = 2e-04
Identities = 30/72 (41%), Positives = 38/72 (52%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQ 433
+KGV+ GF+YK+R+VYAHFP+N V+M GV S Q
Sbjct: 46 IKGVSLGFRYKVRSVYAHFPLNV----------------------VQMRTGVACSVSQAQ 83
Query: 434 KDELIIEGNSLE 469
KDELI+EGN E
Sbjct: 84 KDELILEGNDTE 95
Score = 32.7 bits (71), Expect = 4.5
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 207 KELAAVRTVCSXVENMLK 260
KELA VRT+CS V+NM+K
Sbjct: 30 KELATVRTICSHVQNMIK 47
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 47.2 bits (107), Expect = 2e-04
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQKD 439
GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR + V +
Sbjct: 76 GVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTIHGDTDVEI---DGE 130
Query: 440 ELIIEGNSLE 469
EL + G +E
Sbjct: 131 ELTVSGPDIE 140
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 45.2 bits (102), Expect = 8e-04
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +2
Query: 257 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQK 436
KGVT+G +YK++ VY+HFP + + I NF+GE P V + P +
Sbjct: 97 KGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGEN-------VPRVAEIVDP-EN 148
Query: 437 DELIIEGNSL 466
E+I++G +
Sbjct: 149 TEVIVQGQDI 158
Score = 32.7 bits (71), Expect = 4.5
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +3
Query: 30 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 194
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 195 FGSKKELAAVRTVCSXVENMLK 260
++++ A + + + +ENM K
Sbjct: 76 RSNRRQKAILGMIKAYIENMQK 97
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 245 REHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVXS 424
R +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V+
Sbjct: 78 RNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI-- 133
Query: 425 PKQKDELI 448
PK +D L+
Sbjct: 134 PKGEDVLL 141
Score = 39.1 bits (87), Expect = 0.052
Identities = 21/93 (22%), Positives = 49/93 (52%)
Frame = +3
Query: 45 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 224
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 225 RTVCSXVENMLKE*LKASNTRCVLCMLTSPLTV 323
T S + N+ + ++ + + P+TV
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 43.6 bits (98), Expect = 0.002
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 257 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 403
+GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 80 RGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Score = 34.3 bits (75), Expect = 1.5
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 45 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 224
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 225 RTVCSXVENMLK 260
T + + NM +
Sbjct: 69 GTWAAHLTNMAR 80
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.010
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 21 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 176
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 39.1 bits (87), Expect = 0.052
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 212
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 213 LAAVRTVCSXVENML 257
A T S + NM+
Sbjct: 62 RALHGTTRSLINNMV 76
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 38.7 bits (86), Expect = 0.069
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 209
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 210 ELAAVRTVCSXVENMLK 260
A T + V NM++
Sbjct: 63 TRAMAGTTRALVNNMVQ 79
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.091
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 137
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 37.9 bits (84), Expect = 0.12
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 197
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 198 GSKKELAAVR-TVCSXVENMLK 260
+K L A+R T S V NM+K
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIK 86
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 37.5 bits (83), Expect = 0.16
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3
Query: 481 LETIFQRVAFND*FILLFWRVXDSHTRCHLYPSDVFLTQEVTYLNN*ITL--SGDTVNGE 308
L FQ V N+ FILL R T S+ F TQE++ N +T+ + VN E
Sbjct: 53 LRNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNVILTIFFNNVNVNWE 112
Query: 307 VSIHSTHLVLEAFS 266
+ I+ +HLV FS
Sbjct: 113 MRINKSHLVFVTFS 126
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 37.1 bits (82), Expect = 0.21
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +3
Query: 87 RLVTVKGPRGVLKRNFKHLAVDIRM 161
+L+ + GPRG+L RNFKH ++DI++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV 77
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.21
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 134
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.37
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 140
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2;
Clostridium|Rep: Signal peptidase I precursor -
Clostridium cellulolyticum H10
Length = 189
Score = 35.1 bits (77), Expect = 0.85
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 282 YWKPLVTPLTCSLXVNRLSSRRQAPFWIRTISQPSGDE 169
+W ++ PL ++ V+R S Q FW++ + +GDE
Sbjct: 80 FWDNVIDPLKYNILVSRFSDNNQQVFWVKRVIGKAGDE 117
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 125
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 34.7 bits (76), Expect = 1.1
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 176
VA +KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 1.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 140
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 33.9 bits (74), Expect = 2.0
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 253 MFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRRDF 80
+F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R F
Sbjct: 24 LFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLRCF 83
Query: 79 T 77
+
Sbjct: 84 S 84
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 2.6
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 48 VKIPDGLTVHVKSRLVTVKGPRGVLKR 128
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 33.5 bits (73), Expect = 2.6
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 209
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 210 ELAAVRTVCSXVENMLK 260
A T S + NM++
Sbjct: 62 HRALHGTTRSLLGNMVE 78
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 3.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 128
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 4.5
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 161
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 4.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 128
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3;
Euryarchaeota|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 255
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 338 NSIIEIRNFLGEKYIRRVKMAPGVTVVXSPKQKDELIIEGN-SLEDGL 478
+SI + NF +K+ R V + PGV V S + KDE G+ ++DG+
Sbjct: 51 SSIGQAENFSRKKFFRGVVLPPGVPVTSSGRIKDETGFPGDVVIKDGI 98
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 48 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 134
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 32.3 bits (70), Expect = 6.0
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +3
Query: 33 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 212
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 213 LAAVRTVCSXVENMLK 260
A + V N +K
Sbjct: 62 RALHGLTRTLVANAVK 77
>UniRef50_UPI00015A3C61 Cluster: vomeronasal 2 receptor 635; n=26;
Monodelphis domestica|Rep: vomeronasal 2 receptor 635 -
Monodelphis domestica
Length = 862
Score = 31.9 bits (69), Expect = 7.9
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 199 PNHFSTFRRRGFTMRMSTAKCLKFL--LRTPRGPLTVTRRDFTWTVSPSGILTF*FATIC 26
P+ F+ + F+M + + + FL ++ +G + V F+ VS +GILT FA C
Sbjct: 782 PDTFNEAKYLTFSMLVFCSVWISFLPAYQSTKGKVMVAMEIFSILVSSAGILTCIFAPKC 841
Query: 25 FMFGLC 8
++ LC
Sbjct: 842 YVILLC 847
>UniRef50_UPI0000F2B3FB Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 490
Score = 31.9 bits (69), Expect = 7.9
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -1
Query: 387 LLMYFSPKKLRISIIELPSVVTQLMGK*AYTARILYWKPLVTPLTCSLXVNRLSSRRQAP 208
LL+ + K + + L +VTQL+ +Y++ +LY P VTPL L + R Q P
Sbjct: 187 LLLALAGKTSKAHVGSLLWIVTQLLFGNSYSSLLLYLDPRVTPLELLLASLSGAKRAQDP 246
Query: 207 FWIRTIS 187
+ +S
Sbjct: 247 TQSKQVS 253
>UniRef50_Q9W0Q1 Cluster: CG17090-PA, isoform A; n=6; Eumetazoa|Rep:
CG17090-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1340
Score = 31.9 bits (69), Expect = 7.9
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 14 PKHEANCSKSESQNPRRAYGPCEIASGDS*RAPRSSQKELQTLGC*HSHGKPSSP 178
PKH N +++ + A+ IA G+S R PR +KE Q L K SSP
Sbjct: 728 PKHHLNLPRNDLKKESPAH---HIAKGNSYRVPRHEKKEHQQLSPVKKRVKESSP 779
>UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA
polymerase - Anopheles gambiae str. PEST
Length = 2225
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 272 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 379
G +YK +YA + + +T +GNS+ E+ FLG+KY
Sbjct: 86 GSRYKTTVIYAPYLL-LITRDGNSL-EVAKFLGKKY 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,846,659
Number of Sequences: 1657284
Number of extensions: 9957128
Number of successful extensions: 23934
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 23365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23909
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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