Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0166
(514 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 131 8e-30
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 107 1e-22
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 99 5e-20
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 97 2e-19
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 95 6e-19
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 94 2e-18
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 92 6e-18
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 85 9e-16
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 81 1e-14
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 78 1e-13
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 77 2e-13
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 76 4e-13
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 75 1e-12
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 72 7e-12
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 71 2e-11
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 69 6e-11
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 66 3e-10
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 5e-08
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 57 2e-07
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 57 3e-07
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 57 3e-07
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 54 1e-06
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 54 2e-06
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 54 3e-06
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 53 3e-06
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 51 2e-05
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 51 2e-05
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 50 2e-05
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 49 5e-05
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 47 2e-04
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 47 3e-04
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 47 3e-04
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 45 0.001
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 44 0.002
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 44 0.002
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 44 0.003
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 40 0.033
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 39 0.058
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 37 0.31
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 36 0.41
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 35 0.95
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 35 0.95
UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2; Clos... 34 1.7
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 34 2.2
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 34 2.2
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 33 3.8
UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p... 33 5.0
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 33 5.0
UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA... 32 8.8
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 32 8.8
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 32 8.8
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 131 bits (317), Expect = 8e-30
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 433
+KGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS Q
Sbjct: 79 IKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQ 138
Query: 434 KDELIIEGNSL 466
KDELI+EGN +
Sbjct: 139 KDELIVEGNDI 149
Score = 105 bits (253), Expect = 4e-22
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFG 200
M+ I +NQ KIP + VK+R+VT+ G RG L R+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 201 SKKXLAAVRTVCSHLENMLK 260
+KK LAAVRTVCSH+ENM+K
Sbjct: 61 TKKELAAVRTVCSHIENMIK 80
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 107 bits (258), Expect = 1e-22
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 433
+KGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S Q
Sbjct: 81 IKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQ 140
Query: 434 KDELIIEGNSL 466
KDELI+EGN +
Sbjct: 141 KDELILEGNDI 151
Score = 89.0 bits (211), Expect = 5e-17
Identities = 38/82 (46%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMV--NPRLLKVEKW 194
MK I++NQ IP+ + + +K R V VKGPRG L R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 195 FGSKKXLAAVRTVCSHLENMLK 260
+G++K LA VRT+CSH++NM+K
Sbjct: 61 WGNRKELATVRTICSHVQNMIK 82
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 99.1 bits (236), Expect = 5e-20
Identities = 43/71 (60%), Positives = 55/71 (77%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 433
+ GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K
Sbjct: 80 ITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKV 139
Query: 434 KDELIIEGNSL 466
KDEL+++GN +
Sbjct: 140 KDELVLDGNDI 150
Score = 89.4 bits (212), Expect = 4e-17
Identities = 38/80 (47%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMV-NPRLLKVEKWF 197
MK I+A++ +IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 198 GSKKXLAAVRTVCSHLENML 257
G+++ +AA+RT SH++N++
Sbjct: 61 GTRRTMAAIRTAISHVQNLI 80
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 97.5 bits (232), Expect = 2e-19
Identities = 39/71 (54%), Positives = 54/71 (76%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 433
+ GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K
Sbjct: 97 ITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKA 156
Query: 434 KDELIIEGNSL 466
KDE+++ GNSL
Sbjct: 157 KDEIVLTGNSL 167
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 66 LTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKKXLAAVRTVCSHL 245
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K +A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 246 ENML 257
ENM+
Sbjct: 94 ENMI 97
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 95.5 bits (227), Expect = 6e-19
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 439
GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KD
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKD 140
Query: 440 ELIIEGNSL 466
E+I+EGNSL
Sbjct: 141 EIILEGNSL 149
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = +3
Query: 24 KQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGS 203
+ I ++ IP G+TV +K+R VTV GPRG L +N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 204 KKXLAAVRTVCSHLENML 257
+K A +R+V S + NM+
Sbjct: 62 RKHNACIRSVYSIINNMI 79
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 93.9 bits (223), Expect = 2e-18
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFG 200
MK + +N PDG+T VK+R+V V GPRG L R+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 201 SKKXLAAVRTVCSHLENMLK 260
+K +AA+RTVCSH++NM+K
Sbjct: 61 VRKEIAAIRTVCSHIQNMIK 80
Score = 73.3 bits (172), Expect = 3e-12
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 397
+KGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 79 IKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 92.3 bits (219), Expect = 6e-18
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 433
+KGVT GFQYKMRAVYAHFPIN + EIRNFLGEK +R + M GVT+ Q
Sbjct: 141 IKGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQ 200
Query: 434 KDELIIEGNSL 466
KD++++EGN +
Sbjct: 201 KDQVLVEGNDI 211
Score = 33.1 bits (72), Expect = 3.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRN 131
M QI +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 85.0 bits (201), Expect = 9e-16
Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP 427
+ GVTKG++YKMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S
Sbjct: 79 ITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFST 138
Query: 428 KQKDELIIEGNSL 466
KDE+++ GNS+
Sbjct: 139 NVKDEIVLSGNSV 151
Score = 77.8 bits (183), Expect = 1e-13
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFG 200
MK I Q+ ++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 201 SKKXLAAVRTVCSHLENML 257
+K +AA+RTV S ++NM+
Sbjct: 61 GRKHVAALRTVKSLVDNMI 79
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +2
Query: 257 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 436
KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 437 DELIIEGNSL 466
DELI+ G S+
Sbjct: 138 DELILRGISI 147
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +3
Query: 30 IVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKK 209
+ ++ K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 210 XLAAVRTVCSHLENMLK 260
A RT+CSH+ENM K
Sbjct: 62 RNALPRTICSHIENMFK 78
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 78.2 bits (184), Expect = 1e-13
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Frame = +2
Query: 218 RREDSLF-TFREHVK----GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 382
RR+ ++ T H+K GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK
Sbjct: 72 RRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRT 131
Query: 383 RRVKMAPGVTVVNSPKQKDELIIEGNSL 466
R ++M GV V KDE+ +EGN +
Sbjct: 132 RHIEMYDGVVV--KKLGKDEICLEGNDV 157
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Frame = +3
Query: 54 IPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDI-------RMVNPR--LLKVEKWFGSK 206
IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W+G++
Sbjct: 13 IPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNR 72
Query: 207 KXLAAVRTVCSHLENML 257
+ A VRT+ SH++NM+
Sbjct: 73 RDSAVVRTIASHIKNMI 89
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 77.4 bits (182), Expect = 2e-13
Identities = 35/82 (42%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLK--VEKW 194
MK I++NQ IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 195 FGSKKXLAAVRTVCSHLENMLK 260
+G++K LA V T+CS ++N +K
Sbjct: 61 WGNRKELATVHTICSPVQNTIK 82
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 76.2 bits (179), Expect = 4e-13
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 433
+ GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +
Sbjct: 80 IVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAK 139
Query: 434 KDELIIEGNSL 466
KDE+ + G+ L
Sbjct: 140 KDEISVFGSDL 150
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRL-LKVEKWF 197
M I +K KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 198 GSKKXLAAVRTVCSHLENML 257
KK LA + T+ SH+ NM+
Sbjct: 61 AGKKQLAKLNTIASHITNMI 80
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 74.5 bits (175), Expect = 1e-12
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +2
Query: 203 QKGACRREDSLFTFREHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 382
+K C+ R ++GVT G+++KM YAHFPI +EI+NFLGEK I
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKII 130
Query: 383 RRVKMAPGVTVV-NSPKQKDELIIEGNSLGRCL*LC 487
R +K PGVT+ N ++K+ L ++GN L C
Sbjct: 131 RTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTC 166
Score = 56.8 bits (131), Expect = 3e-07
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRM---VNPR------ 173
MK I+ + IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 174 LLKVEKWFGSKKXLAAVRTVCSHLENMLKE*LKASNTRCVLCMLTSPLTVS 326
+ V W +K V +V S + NM++ + VL P+ ++
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIIN 111
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 72.1 bits (169), Expect = 7e-12
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Frame = +3
Query: 21 MKQIVANQKXKIP-DGLTVHV--KSRLVTVKGPRGVLXRNFKHLAVDIRMVNP-RLLKVE 188
MK I + +IP DG TV V KSR + V G G L R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 189 KWFGSKKXLAAVRTVCSHLENML 257
WFG K A +RTVCSH+ENM+
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMI 142
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 367
+ GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 142 ITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 70.5 bits (165), Expect = 2e-11
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Frame = +2
Query: 194 VRIQKGACRREDSLF--TFREHV----KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEI 355
V I K RR+D TF H+ KGVT+GF YK++ VY+HFPI+ V +G+ +I I
Sbjct: 53 VVIYKDFPRRKDVAIARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-I 110
Query: 356 RNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 457
NFLGEK R+ K+ PGVTV + E+I+EG
Sbjct: 111 ENFLGEKAPRKAKILPGVTV---KVRGQEIIVEG 141
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +3
Query: 42 QKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKKXLAA 221
++ +IP+G+ V V+ V VKGP+G L R F + I + ++ + K F +K +A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 222 VRTVCSHLENMLK 260
RT +H+ NM+K
Sbjct: 68 ARTFAAHIRNMIK 80
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 68.9 bits (161), Expect = 6e-11
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = +2
Query: 245 REHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 424
R +K VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V
Sbjct: 95 RNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRL 153
Query: 425 PKQKDELIIEGNSL 466
++KD ++IEG SL
Sbjct: 154 DERKDTIVIEGPSL 167
Score = 38.3 bits (85), Expect = 0.10
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 KQSPNMKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRN-FKH-LAVDIRMVNPRLL 179
K P M+ I+ + K+P+ T + ++ T +GP+G + + +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 180 KVEKWFGSKKXLAAVRTVCSHLENMLK 260
++ W G +K +A TV S L N +K
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIK 99
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 66.5 bits (155), Expect = 3e-10
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
Frame = +2
Query: 239 TFREHV----KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 406
TF+ H+ KGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PG
Sbjct: 70 TFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPG 127
Query: 407 VTV 415
VTV
Sbjct: 128 VTV 130
Score = 54.8 bits (126), Expect = 1e-06
Identities = 32/94 (34%), Positives = 52/94 (55%)
Frame = +3
Query: 42 QKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKKXLAA 221
++ +IP+G+ V V+ V VKGP+G L R K+ V I + +++ + K F KK +A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 222 VRTVCSHLENMLKE*LKASNTRCVLCMLTSPLTV 323
VRT +H+ NM+K + R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 5e-08
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +2
Query: 224 EDSLFTFREHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 403
++ L + EH +G GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++
Sbjct: 20 QNHLQSCSEHDQG---GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRT 76
Query: 404 GVTVVNSPKQKDELI 448
V S QK+EL+
Sbjct: 77 SVAFYASQAQKNELM 91
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/69 (46%), Positives = 46/69 (66%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 439
GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD
Sbjct: 81 GVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKD 135
Query: 440 ELIIEGNSL 466
++I+EG L
Sbjct: 136 DVIVEGIDL 144
Score = 49.2 bits (112), Expect = 5e-05
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHL-AVDIRMVNPRLLKVEKWF 197
M+ + + IP+G+ VHV + V V+GP G + ++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 198 GSKKXLAAVRTVCSHLENML 257
+KK A V T+ S + NM+
Sbjct: 60 ATKKDYALVGTIASIINNMI 79
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 415
++GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV
Sbjct: 75 IRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTV 126
Score = 40.3 bits (90), Expect = 0.025
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +3
Query: 42 QKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKKXLAA 221
++ +IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 222 VRTVCSHLENMLK 260
T+ +H +NM++
Sbjct: 64 TGTLEAHAKNMIR 76
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 56.8 bits (131), Expect = 3e-07
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Frame = +2
Query: 239 TFREHVK----GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 397
TF H++ GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+
Sbjct: 88 TFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKI 142
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 54.4 bits (125), Expect = 1e-06
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRL--LKVEKW 194
M+ I NQ KIP+ + +V VK RG L R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 195 FGSKKXLAAVRTVCSHLENMLK 260
+ K LA T+ SH++NM+K
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIK 75
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 439
GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K+
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKE 140
Query: 440 ELIIEG 457
+++IEG
Sbjct: 141 DIVIEG 146
Score = 31.9 bits (69), Expect = 8.8
Identities = 21/83 (25%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSR-----LVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKV 185
M+ + + ++ +IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 186 EKWFGSKKXLAAVRTVCSHLENM 254
E + K+ A + T L+NM
Sbjct: 60 EVFKARKREYAILGTYKGILKNM 82
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPK 430
+ GVT G++YKM VY+HFPI +E + F+G K + V GV + N
Sbjct: 87 ITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESV 146
Query: 431 QKDELIIEGNSL 466
KDE+ IEG +L
Sbjct: 147 AKDEINIEGANL 158
Score = 37.9 bits (84), Expect = 0.13
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +3
Query: 24 KQIVANQKXKIPDGLTVHVKSRLVTVK--GPR----GVLXRNFKHLAVDIRM-VNPRLLK 182
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 183 VEKWFGSKKXLAAVRTVCSHLENML 257
WFG++K LA + T+ ++NM+
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMI 87
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +2
Query: 218 RREDSLFTFREHVK----GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 385
R++ L++ H+K G G++Y ++ + HFPI+ V G+ + ++ N +GEK IR
Sbjct: 66 RKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIR 123
Query: 386 RVKMAPGVTVVNSPKQKDELIIEGNSL 466
R K+ PGV V + +++++EG+ +
Sbjct: 124 RAKILPGVKVT---VKGEDIVVEGSDI 147
Score = 43.2 bits (97), Expect = 0.004
Identities = 21/80 (26%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRM-VNPRLLKVEKWF 197
+K ++ +IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 198 GSKKXLAAVRTVCSHLENML 257
++ A + ++ +H++NM+
Sbjct: 63 ADRRKKALLYSIIAHIKNMI 82
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 50.8 bits (116), Expect = 2e-05
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Frame = +2
Query: 212 ACRREDSLF-TFREHVKGVTKGFQ----YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 376
A RRE L T+R H+K + +G Q Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 59 ATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
Query: 377 --YIRRVKMAPGVTV-VNSPKQKDELIIE 454
I+ + V V + K + E+++E
Sbjct: 117 APIIKELPYLDKVKVKIEQNKDETEIVVE 145
Score = 45.2 bits (102), Expect = 9e-04
Identities = 25/101 (24%), Positives = 50/101 (49%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFG 200
M+ + + IP+ + V ++ ++ V GP+G + R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 201 SKKXLAAVRTVCSHLENMLKE*LKASNTRCVLCMLTSPLTV 323
+++ + T SH++NML+ R +C P+ V
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 50.8 bits (116), Expect = 2e-05
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Frame = +2
Query: 179 EG*EMVRIQKGACRREDSLFTFREHVK----GVTKGFQYKMRAVYAHFPINCVTTEGNSI 346
EG +V + ++ + TF H+K GV++GF+ KM VYAHFP+ V EG ++
Sbjct: 48 EGEVVVDAESSRKEQKAMVGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTL 106
Query: 347 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 457
+ I NFLGEK R K+ G T V +E+++ G
Sbjct: 107 V-IGNFLGEKKPRIAKIL-GETKVK--VSGNEIVVSG 139
Score = 41.5 bits (93), Expect = 0.011
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +3
Query: 51 KIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKKXLAAVRT 230
+IP+G++V + + T KGP+G + R F + + I + ++ V+ K+ A V T
Sbjct: 10 EIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVGT 68
Query: 231 VCSHLENML 257
SHL+N++
Sbjct: 69 FASHLKNLI 77
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 415
++GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V
Sbjct: 78 IEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV 129
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 49.2 bits (112), Expect = 5e-05
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Frame = +2
Query: 239 TFREHVK----GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 388
TF+ H++ GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR
Sbjct: 65 TFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRR 116
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +2
Query: 260 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 439
GV+KGF Y ++ VY+HFPI+ + + +EI N G K I + V V + K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKK 142
Query: 440 ELII 451
E+I+
Sbjct: 143 EIIL 146
Score = 38.7 bits (86), Expect = 0.077
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDI--RMVNPRLLKVEKW 194
MK ++ +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 195 FGSKKXLAAVRTVCSHLENML 257
+ +K A VRT+ S + NM+
Sbjct: 61 YNNKSSSAIVRTITSIIYNMI 81
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = +2
Query: 245 REHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 424
R +GV G+ K++ VYAHFPI + +G ++I + NF GE+ R+ K+ G VV+
Sbjct: 60 RNLCEGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAKIVGGTKVVS- 116
Query: 425 PKQKDELIIEGNSL 466
+ +++I+ G+ L
Sbjct: 117 --KGEDVIVTGHVL 128
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 46.8 bits (106), Expect = 3e-04
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 433
VKG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T V+ +
Sbjct: 78 VKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQVS--VK 132
Query: 434 KDELIIEGNS 463
D L + G S
Sbjct: 133 GDRLFLNGPS 142
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/69 (42%), Positives = 37/69 (53%)
Frame = +2
Query: 254 VKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 433
+KGV+ GF+YK+R+VYAHFP+N V+M GV S Q
Sbjct: 46 IKGVSLGFRYKVRSVYAHFPLNV----------------------VQMRTGVACSVSQAQ 83
Query: 434 KDELIIEGN 460
KDELI+EGN
Sbjct: 84 KDELILEGN 92
Score = 32.7 bits (71), Expect = 5.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 207 KXLAAVRTVCSHLENMLK 260
K LA VRT+CSH++NM+K
Sbjct: 30 KELATVRTICSHVQNMIK 47
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 245 REHVKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 424
R +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V+
Sbjct: 78 RNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI-- 133
Query: 425 PKQKDELI 448
PK +D L+
Sbjct: 134 PKGEDVLL 141
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/91 (21%), Positives = 46/91 (50%)
Frame = +3
Query: 51 KIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKKXLAAVRT 230
+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K+ A + T
Sbjct: 14 EIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAILHT 72
Query: 231 VCSHLENMLKE*LKASNTRCVLCMLTSPLTV 323
S + N+ + ++ + + P+TV
Sbjct: 73 ARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +2
Query: 257 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 436
KGVT+G +YK++ VY+HFP + + I NF+GE P V + P +
Sbjct: 97 KGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGEN-------VPRVAEIVDP-EN 148
Query: 437 DELIIEGNSL 466
E+I++G +
Sbjct: 149 TEVIVQGQDI 158
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 257 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 403
+GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 80 RGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Score = 35.1 bits (77), Expect = 0.95
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 45 KXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKKXLAAV 224
K +P+G+T V VTV L R F+H +++R + L+V KK A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 225 RTVCSHLENMLK 260
T +HL NM +
Sbjct: 69 GTWAAHLTNMAR 80
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 39.9 bits (89), Expect = 0.033
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +3
Query: 21 MKQIVANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKH--LAVDIRMVNPRL 176
MK+++ +K +IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 39.1 bits (87), Expect = 0.058
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +3
Query: 33 VANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNF-KHLAVDIRMVNPRLLK----VEKWF 197
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 198 GSKKXLAAVR-TVCSHLENMLK 260
+K L A+R T SH+ NM+K
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIK 86
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 36.7 bits (81), Expect = 0.31
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +3
Query: 87 RLVTVKGPRGVLXRNFKHLAVDIRM 161
+L+ + GPRG+L RNFKH ++DI++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV 77
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 36.7 bits (81), Expect = 0.31
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = -1
Query: 514 DCVDCWMRAAELETSSQRVAFND*FILLFWRVNDSHTRCHLYPSDVFLTQEVTYLNN*IT 335
D D ++ L S Q V N+ FILL R T S+ F TQE++ N +T
Sbjct: 42 DTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNVILT 101
Query: 334 L--SGDTVNGEVSIHSTHLVLEAFS 266
+ + VN E+ I+ +HLV FS
Sbjct: 102 IFFNNVNVNWEMRINKSHLVFVTFS 126
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 36.3 bits (80), Expect = 0.41
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 33 VANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFK 137
+ K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 35.1 bits (77), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 33 VANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNF 134
+A + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 35.1 bits (77), Expect = 0.95
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 51 KIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKKXLAAVRT 230
+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+ A T
Sbjct: 10 EIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEHRALHGT 67
Query: 231 VCSHLENML 257
S + NM+
Sbjct: 68 TRSLINNMV 76
>UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2;
Clostridium|Rep: Signal peptidase I precursor -
Clostridium cellulolyticum H10
Length = 189
Score = 34.3 bits (75), Expect = 1.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 282 YWKPLVTPLTCSLNVNRLSSRRQAPFWIRTISQPSGDE 169
+W ++ PL ++ V+R S Q FW++ + +GDE
Sbjct: 80 FWDNVIDPLKYNILVSRFSDNNQQVFWVKRVIGKAGDE 117
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 33 VANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKH 140
+ N+ IP G+TV + R + V+GP+G L +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKGKL--SFKH 37
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 33.9 bits (74), Expect = 2.2
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 33 VANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 209
VA K+P G+ V + +L++VKGP+G L H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTL-ELIIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 210 XLAAVRTVCSHLENMLK 260
A T + + NM++
Sbjct: 63 TRAMAGTTRALVNNMVQ 79
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 33.1 bits (72), Expect = 3.8
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 33 VANQKXKIPDGLTVHVKSRLVTVKGPRGVLXRNFKHLAVDIRMVNPRL 176
VA KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p -
Drosophila melanogaster (Fruit fly)
Length = 730
Score = 32.7 bits (71), Expect = 5.0
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 180 KVEKWFGSKKXLAAVRTVCSHLENMLKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLR 353
++E+ G++ A+++ H+E LKE +K + C+ L SP+ + R+ QLL+
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLLK 372
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 32.7 bits (71), Expect = 5.0
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 33 VANQKXKIPDGLTVHVK-SRLVTVKGPRGVLXRNFKHLAVDIRMVNPRLLKVEKWFGSKK 209
V + +IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 210 XLAAVRTVCSHLENMLK 260
A T S L NM++
Sbjct: 62 HRALHGTTRSLLGNMVE 78
>UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA
polymerase - Anopheles gambiae str. PEST
Length = 2225
Score = 31.9 bits (69), Expect = 8.8
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 272 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 379
G +YK +YA + + +T +GNS+ E+ FLG+KY
Sbjct: 86 GSRYKTTVIYAPYLL-LITRDGNSL-EVAKFLGKKY 119
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 31.9 bits (69), Expect = 8.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 33 VANQKXKIPDGLTVHVKSR-LVTVKGPRGVLXRNFKH 140
V N+ ++P+ + V +K R ++V+GP+G L F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 31.9 bits (69), Expect = 8.8
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 54 IPDGLTVHVKSRLVTVKGPRGVL 122
IP G+TV +K +VTVKGP+G L
Sbjct: 11 IPAGVTVTLKDDVVTVKGPKGEL 33
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,595,886
Number of Sequences: 1657284
Number of extensions: 10037369
Number of successful extensions: 22861
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 22355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22837
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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