Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0162
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 168 7e-41
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 138 1e-31
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 122 5e-27
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 118 8e-26
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 115 9e-25
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 111 9e-24
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 107 2e-22
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 101 9e-21
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 98 1e-19
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 98 1e-19
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 91 1e-17
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 89 5e-17
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 84 3e-15
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 81 1e-14
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 77 4e-13
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 76 5e-13
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 73 6e-12
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 69 6e-11
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 68 1e-10
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 67 2e-10
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 67 2e-10
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 67 2e-10
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 66 4e-10
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 65 1e-09
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 64 3e-09
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 62 9e-09
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 61 2e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 59 6e-08
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 59 9e-08
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 58 1e-07
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 57 3e-07
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 57 3e-07
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 56 6e-07
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 54 2e-06
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 54 2e-06
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 53 6e-06
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 42 0.008
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.014
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 39 0.074
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 39 0.098
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 38 0.13
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.13
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.30
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.52
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.6
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 35 1.6
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.1
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 2.1
UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p... 34 2.8
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 3.7
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 33 3.7
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 4.9
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 6.4
UniRef50_A0UUM1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 6.4
UniRef50_P92943 Cluster: Chloride channel protein CLC-d; n=8; Ma... 33 6.4
UniRef50_A7EQ07 Cluster: Putative uncharacterized protein; n=2; ... 32 8.5
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 8.5
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 32 8.5
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 168 bits (409), Expect = 7e-41
Identities = 82/106 (77%), Positives = 91/106 (85%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKD
Sbjct: 81 GVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKD 140
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTVV 572
ELI+EGN +E VS SAALIQQSTTV+ + LDG Y SE+TTVV
Sbjct: 141 ELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
Score = 113 bits (273), Expect = 2e-24
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 195
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 196 SKKELAAVRTVCSHVENMIK 255
+KKELAAVRTVCSH+ENMIK
Sbjct: 61 TKKELAAVRTVCSHIENMIK 80
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 138 bits (333), Expect = 1e-31
Identities = 69/105 (65%), Positives = 81/105 (77%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S QKD
Sbjct: 83 GVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKD 142
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTV 569
ELI+EGN +E VS+SAALIQQ+TTV+ + LDG Y SE+ TV
Sbjct: 143 ELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
Score = 96.7 bits (230), Expect = 3e-19
Identities = 42/82 (51%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKW 189
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 190 FGSKKELAAVRTVCSHVENMIK 255
+G++KELA VRT+CSHV+NMIK
Sbjct: 61 WGNRKELATVRTICSHVQNMIK 82
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 122 bits (295), Expect = 5e-27
Identities = 60/108 (55%), Positives = 76/108 (70%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K KD
Sbjct: 82 GVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKD 141
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTVVLD 578
EL+++GN +E VS SAALI Q V+ + LDG Y S++ T+ D
Sbjct: 142 ELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
Score = 92.3 bits (219), Expect = 8e-18
Identities = 40/80 (50%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 192
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 193 GSKKELAAVRTVCSHVENMI 252
G+++ +AA+RT SHV+N+I
Sbjct: 61 GTRRTMAAIRTAISHVQNLI 80
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 118 bits (285), Expect = 8e-26
Identities = 60/105 (57%), Positives = 73/105 (69%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KD
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKD 140
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTV 569
E+I+EGNSLE+VS SAA I+Q VR + LDG Y SE +
Sbjct: 141 EIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
Score = 66.5 bits (155), Expect = 4e-10
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = +1
Query: 19 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 198
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 199 KKELAAVRTVCSHVENMI 252
+K A +R+V S + NMI
Sbjct: 62 RKHNACIRSVYSIINNMI 79
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 115 bits (276), Expect = 9e-25
Identities = 51/105 (48%), Positives = 71/105 (67%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K KD
Sbjct: 99 GVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKD 158
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTV 569
E+++ GNSLE +S S A IQ + ++ + LDG Y SE +
Sbjct: 159 EIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
Score = 72.9 bits (171), Expect = 5e-12
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = +1
Query: 61 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 240
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 241 ENMI 252
ENMI
Sbjct: 94 ENMI 97
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 111 bits (268), Expect = 9e-24
Identities = 55/106 (51%), Positives = 70/106 (66%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT GFQYKMRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD
Sbjct: 143 GVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKD 202
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTVV 572
++++EGN ++ VS SAAL+ +T VR + LDG Y + + TVV
Sbjct: 203 QVLVEGNDIDLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
Score = 33.9 bits (74), Expect = 2.8
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 126
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 107 bits (256), Expect = 2e-22
Identities = 56/110 (50%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 428
GVTKG++YKMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S
Sbjct: 81 GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNV 140
Query: 429 KDELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTVVLD 578
KDE+++ GNS+EDVS +AA +QQ VR + LDG Y S + + D
Sbjct: 141 KDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 195
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 196 SKKELAAVRTVCSHVENMI 252
+K +AA+RTV S V+NMI
Sbjct: 61 GRKHVAALRTVKSLVDNMI 79
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 101 bits (243), Expect = 9e-21
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 195
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 196 SKKELAAVRTVCSHVENMIK 255
+KE+AA+RTVCSH++NMIK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIK 80
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 392
GVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 81 GVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 98.3 bits (234), Expect = 1e-19
Identities = 51/108 (47%), Positives = 66/108 (61%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK R ++M GV V KD
Sbjct: 91 GVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLGKD 148
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTVVLD 578
E+ +EGN +E VS SAA I + VR + LDG Y SE+ + D
Sbjct: 149 EICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLIEND 196
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Frame = +1
Query: 37 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 189
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 190 FGSKKELAAVRTVCSHVENMI 252
+G++++ A VRT+ SH++NMI
Sbjct: 69 YGNRRDSAVVRTIASHIKNMI 89
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 98.3 bits (234), Expect = 1e-19
Identities = 50/100 (50%), Positives = 62/100 (62%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT GF+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S KD
Sbjct: 79 GVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVKD 138
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGS 554
ELI+ G S+EDVS +AA I +S V + LDG Y S
Sbjct: 139 ELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVS 178
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +1
Query: 25 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 204
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 205 ELAAVRTVCSHVENMIK 255
A RT+CSH+ENM K
Sbjct: 62 RNALPRTICSHIENMFK 78
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 91.5 bits (217), Expect = 1e-17
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KD
Sbjct: 82 GVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKD 141
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPY 548
E+ + G+ L VS +AA IQQS + + LDG Y
Sbjct: 142 EISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIY 179
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 192
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 193 GSKKELAAVRTVCSHVENMI 252
KK+LA + T+ SH+ NMI
Sbjct: 61 AGKKQLAKLNTIASHITNMI 80
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 89.4 bits (212), Expect = 5e-17
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV-NSPKQK 431
GVT G+++KM YAHFPI +EI+NFLGEK IR +K PGVT+ N ++K
Sbjct: 90 GVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVTITRNEAEEK 149
Query: 432 DELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEE 560
+ L ++GN L +VS + ALI Q+ V+ + LDG Y SE+
Sbjct: 150 NVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 168
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 169 LLKVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVS 321
+ V W +K+ V +V S + NMI+ + VL P+ ++
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIIN 111
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 189
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 190 FGSKKELAAVRTVCSHVENMIK 255
+G++KELA V T+CS V+N IK
Sbjct: 61 WGNRKELATVHTICSPVQNTIK 82
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 81.4 bits (192), Expect = 1e-14
Identities = 44/100 (44%), Positives = 58/100 (58%)
Frame = +3
Query: 258 VTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDE 437
VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V ++KD
Sbjct: 101 VTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDERKDT 159
Query: 438 LIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSE 557
++IEG SL DVS SA I + R S LDG + +E
Sbjct: 160 IVIEGPSLSDVSQSAGTITNECKAKNRDSRVFLDGIFVTE 199
Score = 39.9 bits (89), Expect = 0.042
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 174
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 175 KVEKWFGSKKELAAVRTVCSHVENMIK 255
++ W G +K +A TV S + N IK
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIK 99
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 76.6 bits (180), Expect = 4e-13
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV +
Sbjct: 81 GVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRGQ 135
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTV 509
E+I+EG E V +AA I+Q+T +
Sbjct: 136 EIIVEGIDKEAVGQTAANIEQATRI 160
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +1
Query: 37 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 216
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 217 VRTVCSHVENMIK 255
RT +H+ NMIK
Sbjct: 68 ARTFAAHIRNMIK 80
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 76.2 bits (179), Expect = 5e-13
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = +1
Query: 16 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 183
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 184 KWFGSKKELAAVRTVCSHVENMI 252
WFG K A +RTVCSH+ENMI
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMI 142
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 362
GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 144 GVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 72.5 bits (170), Expect = 6e-12
Identities = 38/85 (44%), Positives = 57/85 (67%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV +
Sbjct: 81 GVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV---KVKGS 135
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTV 509
E+ +EG E V +AA I+Q+T +
Sbjct: 136 EIEVEGIDKEAVGQTAANIEQATRI 160
Score = 59.7 bits (138), Expect = 5e-08
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = +1
Query: 37 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 216
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 217 VRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 318
VRT +H+ NMIK + R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 69.3 bits (162), Expect = 6e-11
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPKQK 431
GVT G++YKM VY+HFPI +E + F+G K + V GV + N K
Sbjct: 89 GVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAK 148
Query: 432 DELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPY 548
DE+ IEG +LEDVS I Q T ++ + LDG Y
Sbjct: 149 DEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDGIY 187
Score = 38.7 bits (86), Expect = 0.098
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +1
Query: 19 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 177
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 178 VEKWFGSKKELAAVRTVCSHVENMI 252
WFG++K LA + T+ V+NMI
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMI 87
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 68.1 bits (159), Expect = 1e-10
Identities = 42/101 (41%), Positives = 58/101 (57%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV D
Sbjct: 77 GVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVKIG---ND 131
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSE 557
E+ I G E V ++AA I+ +T + R DG Y +E
Sbjct: 132 EVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITE 172
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +1
Query: 37 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 216
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 217 VRTVCSHVENMIK 255
T+ +H +NMI+
Sbjct: 64 TGTLEAHAKNMIR 76
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 67.3 bits (157), Expect = 2e-10
Identities = 45/105 (42%), Positives = 59/105 (56%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GV+ GF+YK+R+VYAHFP+N V +M GV S QKD
Sbjct: 48 GVSLGFRYKVRSVYAHFPLNVV----------------------QMRTGVACSVSQAQKD 85
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTV 569
ELI+EGN E VS+SAALIQ++T V + +DG Y SE+ T+
Sbjct: 86 ELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEKGTM 130
Score = 37.1 bits (82), Expect = 0.30
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 202 KELAAVRTVCSHVENMIK 255
KELA VRT+CSHV+NMIK
Sbjct: 30 KELATVRTICSHVQNMIK 47
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 67.3 bits (157), Expect = 2e-10
Identities = 43/103 (41%), Positives = 65/103 (63%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD
Sbjct: 81 GVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKD 135
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEET 563
++I+EG L+ V+ +AA I +T +R + + S P+G E T
Sbjct: 136 DVIVEGIDLDAVAQTAANIHLATHLRGKRALS----PHGREGT 174
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 192
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 193 GSKKELAAVRTVCSHVENMI 252
+KK+ A V T+ S + NMI
Sbjct: 60 ATKKDYALVGTIASIINNMI 79
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/98 (37%), Positives = 58/98 (59%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S +
Sbjct: 99 GVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ--- 153
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPY 548
++ + G +E+ +AA ++Q+T ++ + DG Y
Sbjct: 154 DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIY 191
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 66.5 bits (155), Expect = 4e-10
Identities = 38/102 (37%), Positives = 61/102 (59%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GV G+ K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + +
Sbjct: 65 GVGVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGE 119
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEE 560
++I+ G+ L DVS +AA ++Q T V+ + LDG Y E+
Sbjct: 120 DVIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 219 EDSLFTCREHD*GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 398
++ L +C EHD G GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++
Sbjct: 20 QNHLQSCSEHDQG---GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRT 76
Query: 399 GVTVVNSPKQKDELI 443
V S QK+EL+
Sbjct: 77 SVAFYASQAQKNELM 91
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 63.7 bits (148), Expect = 3e-09
Identities = 39/108 (36%), Positives = 61/108 (56%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K+
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKE 140
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEETTVVLD 578
+++IEG E VS+ AA +Q +T + P+G E V+D
Sbjct: 141 DIVIEGIDRELVSTFAAAVQAAT----ELHGDERPSPHGREGGLGVVD 184
Score = 35.1 bits (77), Expect = 1.2
Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 180
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 181 EKWFGSKKELAAVRTVCSHVENM 249
E + K+E A + T ++NM
Sbjct: 60 EVFKARKREYAILGTYKGILKNM 82
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 62.1 bits (144), Expect = 9e-09
Identities = 37/86 (43%), Positives = 54/86 (62%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+ G T V +
Sbjct: 79 GVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETKVK--VSGN 133
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVR 512
E+++ G + EDV +AA I+Q T ++
Sbjct: 134 EIVVSGINKEDVGQTAANIEQKTKIK 159
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +1
Query: 43 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 222
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 223 TVCSHVENMI 252
T SH++N+I
Sbjct: 68 TFASHLKNLI 77
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/85 (34%), Positives = 54/85 (63%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
G G++Y ++ + HFPI+ V G+ + ++ N +GEK IRR K+ PGV V + +
Sbjct: 84 GTINGYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILPGVKVT---VKGE 138
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTV 509
++++EG+ + +V+ +AA I+ ST +
Sbjct: 139 DIVVEGSDIYNVAQTAANIESSTKI 163
Score = 46.0 bits (104), Expect = 6e-04
Identities = 22/80 (27%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 192
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 193 GSKKELAAVRTVCSHVENMI 252
+++ A + ++ +H++NMI
Sbjct: 63 ADRRKKALLYSIIAHIKNMI 82
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 59.3 bits (137), Expect = 6e-08
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 189
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 190 FGSKKELAAVRTVCSHVENMIK 255
+ K LA T+ SHV+NMIK
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIK 75
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 58.8 bits (136), Expect = 9e-08
Identities = 38/98 (38%), Positives = 54/98 (55%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR + G T V +
Sbjct: 76 GVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-HGDTDVEI--DGE 130
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPY 548
EL + G +E V +AA I+Q T + + DG Y
Sbjct: 131 ELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVY 168
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/98 (30%), Positives = 50/98 (51%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GV+KGF Y ++ VY+HFPI+ + + +EI N G K I + V V + K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKK 142
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPY 548
E+I+ +E + ++LIQ ++ + +DG Y
Sbjct: 143 EIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIY 180
Score = 42.3 bits (95), Expect = 0.008
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 189
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 190 FGSKKELAAVRTVCSHVENMI 252
+ +K A VRT+ S + NMI
Sbjct: 61 YNNKSSSAIVRTITSIIYNMI 81
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 56.8 bits (131), Expect = 3e-07
Identities = 36/102 (35%), Positives = 57/102 (55%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V+ PK +D
Sbjct: 83 GLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGED 138
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPYGSEE 560
+++ G D++ +AA I+ +T V+ + LDG Y E+
Sbjct: 139 -VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
Score = 38.3 bits (85), Expect = 0.13
Identities = 21/93 (22%), Positives = 49/93 (52%)
Frame = +1
Query: 40 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 219
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 220 RTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 318
T S + N+ + ++ + + P+TV
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 56.8 bits (131), Expect = 3e-07
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V + D
Sbjct: 80 GVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV---SVKGD 134
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVR 512
+ I G + +AA I+++T +R
Sbjct: 135 RITINGIDKRKIGETAANIERATYIR 160
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 56.0 bits (129), Expect = 6e-07
Identities = 31/86 (36%), Positives = 55/86 (63%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 434
G+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T V+ + D
Sbjct: 80 GLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQVS--VKGD 134
Query: 435 ELIIEGNSLEDVSSSAALIQQSTTVR 512
L + G S +DV +AA I+++T ++
Sbjct: 135 RLFLNGPSKKDVGETAANIERATIIK 160
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP--GVTVVNSPKQ 428
GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P V +
Sbjct: 81 GVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEVEVKVQN 137
Query: 429 KDELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPY 548
K ++ + G E V +AA I++S ++ R DG Y
Sbjct: 138 KTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIY 177
Score = 37.9 bits (84), Expect = 0.17
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +1
Query: 40 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 219
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 220 RTVCSHVENMIK 255
T +H+ NM +
Sbjct: 69 GTWAAHLTNMAR 80
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 54.4 bits (125), Expect = 2e-06
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +3
Query: 255 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQK 431
GVT+G +YK++ VY+HFP + + I NF+GE R ++ P T V Q
Sbjct: 98 GVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQG 155
Query: 432 DELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDGPY 548
++I+ G E V +AA ++Q+T ++ R DG Y
Sbjct: 156 QDIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIY 194
Score = 33.5 bits (73), Expect = 3.7
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +1
Query: 25 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 189
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 190 FGSKKELAAVRTVCSHVENMIK 255
++++ A + + +++ENM K
Sbjct: 76 RSNRRQKAILGMIKAYIENMQK 97
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 52.8 bits (121), Expect = 6e-06
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Frame = +3
Query: 207 ACRREDSLF-TCREHD*GVTKGFQ----YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 371
A RRE L T R H + +G Q Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 59 ATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
Query: 372 --YIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQST 503
I+ + V V + K + E+++E E A++I+QST
Sbjct: 117 APIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQST 163
Score = 49.6 bits (113), Expect = 5e-05
Identities = 25/101 (24%), Positives = 53/101 (52%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 195
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 196 SKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 318
+++E + T SH++NM++ R +C P+ V
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 44.8 bits (101), Expect = 0.001
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = -1
Query: 572 HNSCFLRSIRXIQRTF*YPYSYCSRLLDESSRARDIFQRVAFND*FILLFWRVNDSHTRC 393
+N R+I IQ S + LL+ SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 392 HLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFS 261
S+ F TQE++ N +T+ + VN E+ I+ +HLV FS
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFS 126
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 42.3 bits (95), Expect = 0.008
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 192
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 193 GSKKELAAVR-TVCSHVENMIK 255
+K L A+R T SHV NMIK
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIK 86
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.014
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +1
Query: 16 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 171
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 39.1 bits (87), Expect = 0.074
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 207
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 208 LAAVRTVCSHVENMI 252
A T S + NM+
Sbjct: 62 RALHGTTRSLINNMV 76
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 38.7 bits (86), Expect = 0.098
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 204
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 205 ELAAVRTVCSHVENMIK 255
A T + V NM++
Sbjct: 63 TRAMAGTTRALVNNMVQ 79
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 38.3 bits (85), Expect = 0.13
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Frame = +1
Query: 82 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 234
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 235 HVENMIK 255
++NMI+
Sbjct: 113 QIKNMIR 119
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.13
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 132
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.30
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 129
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.52
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 135
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 120
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 34.7 bits (76), Expect = 1.6
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 171
VA +KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 2.1
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 254 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 81
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 80 DFT 72
F+
Sbjct: 82 CFS 84
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 2.1
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 135
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p -
Drosophila melanogaster (Fruit fly)
Length = 730
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 175 KVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLR 348
++E+ G++ E A+++ H+E +KE +K + C+ L SP+ + R+ QLL+
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLLK 372
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 3.7
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 43 VKIPDGLTVHVKSRLVTVKGPRGVLKR 123
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 33.5 bits (73), Expect = 3.7
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 204
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 205 ELAAVRTVCSHVENMIK 255
A T S + NM++
Sbjct: 62 HRALHGTTRSLLGNMVE 78
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 4.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 123
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 156
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_A0UUM1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 365
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 396 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVRIRISESSLDG 542
PG+ + S +++++G + DVS L+Q S T +R S+ L G
Sbjct: 276 PGLRITESTSLGPDVVVQGKVI-DVSDKQVLVQTSRTDAVRFSKDELSG 323
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 123
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_P92943 Cluster: Chloride channel protein CLC-d; n=8;
Magnoliophyta|Rep: Chloride channel protein CLC-d -
Arabidopsis thaliana (Mouse-ear cress)
Length = 792
Score = 32.7 bits (71), Expect = 6.4
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +3
Query: 306 PINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAA 485
P V E S+ ++ N + +R + + P + V + +L+IE N SSA
Sbjct: 706 PSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENG----ESSAV 761
Query: 486 LIQQSTTVRIRISESS 533
+QQST+VR R SE++
Sbjct: 762 ELQQSTSVRGRYSETA 777
>UniRef50_A7EQ07 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 1416
Score = 32.3 bits (70), Expect = 8.5
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 521 YPYSYCSRLLDESSRARDIFQRVAFND*FILLF---WRVNDSHTRCHLYPSDVFLTQEVT 351
YP +Y +L + ++ R +FQ V D IL+F W N+ H +P V++TQ+
Sbjct: 725 YPSNYPIQLKTQDAQFRILFQDVPREDKVILVFRATWNPNEQHD----FPGRVYVTQKDI 780
Query: 350 Y 348
Y
Sbjct: 781 Y 781
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 8.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 43 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 129
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 32.3 bits (70), Expect = 8.5
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +1
Query: 28 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 207
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 208 LAAVRTVCSHVENMIK 255
A + V N +K
Sbjct: 62 RALHGLTRTLVANAVK 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,380,455
Number of Sequences: 1657284
Number of extensions: 11771492
Number of successful extensions: 29394
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 28513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29359
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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