Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0161
(363 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 43 1e-04
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 40 0.001
AY119540-1|AAM50194.1| 808|Drosophila melanogaster GH24286p pro... 31 0.34
AE014134-577|AAF51130.2| 808|Drosophila melanogaster CG9663-PA ... 31 0.34
X58286-3|CAB58351.1| 193|Drosophila melanogaster gdl protein. 29 2.4
BT023358-1|AAY55774.1| 194|Drosophila melanogaster IP10311p pro... 29 2.4
AE014296-2514|AAF49633.1| 194|Drosophila melanogaster CG33756-P... 29 2.4
AE014298-1818|AAZ52503.1| 157|Drosophila melanogaster CG33651-P... 28 4.2
BT016091-1|AAV36976.1| 850|Drosophila melanogaster LD39196p pro... 27 5.6
AY061566-1|AAL29114.1| 521|Drosophila melanogaster LP11751p pro... 27 5.6
AL021086-6|CAA15931.1| 850|Drosophila melanogaster EG:86E4.5 pr... 27 5.6
AE014298-298|AAF45696.1| 850|Drosophila melanogaster CG3573-PA ... 27 5.6
AE014297-4029|AAN14097.1| 423|Drosophila melanogaster CG33083-P... 27 5.6
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 27 9.7
AE013599-2320|AAF57972.2| 1302|Drosophila melanogaster CG18471-P... 27 9.7
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = -1
Query: 222 IDVSFCSAPITPLCEWWVHDDSMGSYHFPTLTRVLLSVDRYQINPPIEKFLYNKTDWTKY 43
ID+S S I +C W + D+ GS HFP +T + + R P+ K+ ++ +W ++
Sbjct: 184 IDISLISPQIAHMCSWSISDNLHGSDHFP-ITIHINTPTRPDNTLPLPKYKTDQANWKRF 242
Query: 42 NE 37
NE
Sbjct: 243 NE 244
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = -1
Query: 222 IDVSFCSAPITPLCEWWVHDDSMGSYHFPTLTRVLLSVDRYQINPPIEKFLYNKTDWTKY 43
ID++ CS + P +W + +D GS HFP +T + + + + P F + +W ++
Sbjct: 180 IDLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFPTTNPQKFYRPF--FKLKEANWEQF 237
Query: 42 NELS 31
N L+
Sbjct: 238 NALT 241
>AY119540-1|AAM50194.1| 808|Drosophila melanogaster GH24286p
protein.
Length = 808
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = -2
Query: 203 VLQSLHYANGG---CMMILWGAIIFLRLLVFY 117
+L+SL ANG ++ L+G ++FLR+L FY
Sbjct: 767 ILKSLDMANGNYTLALIFLFGVLVFLRILAFY 798
>AE014134-577|AAF51130.2| 808|Drosophila melanogaster CG9663-PA
protein.
Length = 808
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = -2
Query: 203 VLQSLHYANGG---CMMILWGAIIFLRLLVFY 117
+L+SL ANG ++ L+G ++FLR+L FY
Sbjct: 767 ILKSLDMANGNYTLALIFLFGVLVFLRILAFY 798
>X58286-3|CAB58351.1| 193|Drosophila melanogaster gdl protein.
Length = 193
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 308 YDLIDEFDLCVLNNGSFTLLIILTEI 231
YDL+ E CVLN+G F ++ L E+
Sbjct: 57 YDLLTELANCVLNDGIFVIVKALMEL 82
>BT023358-1|AAY55774.1| 194|Drosophila melanogaster IP10311p
protein.
Length = 194
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 308 YDLIDEFDLCVLNNGSFTLLIILTEI 231
YDL+ E CVLN+G F ++ L E+
Sbjct: 57 YDLLTELANCVLNDGIFVIVKALMEL 82
>AE014296-2514|AAF49633.1| 194|Drosophila melanogaster CG33756-PA,
isoform A protein.
Length = 194
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 308 YDLIDEFDLCVLNNGSFTLLIILTEI 231
YDL+ E CVLN+G F ++ L E+
Sbjct: 57 YDLLTELANCVLNDGIFVIVKALMEL 82
>AE014298-1818|AAZ52503.1| 157|Drosophila melanogaster CG33651-PA
protein.
Length = 157
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -2
Query: 281 CVLNNGSFTLLIILTEIHRLLMSVFVVLQSLHYANGGCMMI 159
C+L S +LI++ + ++ + ++L+ H+ G MMI
Sbjct: 20 CILRPASSMMLIMIMIMIMTMIIMMIILKRFHWHKSGSMMI 60
>BT016091-1|AAV36976.1| 850|Drosophila melanogaster LD39196p
protein.
Length = 850
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 249 NYPNRNPSAIDVSFCSAPITPLCEWWVHDD 160
N N P +D SF I +CE W+H D
Sbjct: 533 NVYNNCPLPVDFSFKEKDIHAICEPWLHVD 562
>AY061566-1|AAL29114.1| 521|Drosophila melanogaster LP11751p
protein.
Length = 521
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 249 NYPNRNPSAIDVSFCSAPITPLCEWWVHDD 160
N N P +D SF I +CE W+H D
Sbjct: 204 NVYNNCPLPVDFSFKEKDIHAICEPWLHVD 233
>AL021086-6|CAA15931.1| 850|Drosophila melanogaster EG:86E4.5
protein.
Length = 850
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 249 NYPNRNPSAIDVSFCSAPITPLCEWWVHDD 160
N N P +D SF I +CE W+H D
Sbjct: 533 NVYNNCPLPVDFSFKEKDIHAICEPWLHVD 562
>AE014298-298|AAF45696.1| 850|Drosophila melanogaster CG3573-PA
protein.
Length = 850
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 249 NYPNRNPSAIDVSFCSAPITPLCEWWVHDD 160
N N P +D SF I +CE W+H D
Sbjct: 533 NVYNNCPLPVDFSFKEKDIHAICEPWLHVD 562
>AE014297-4029|AAN14097.1| 423|Drosophila melanogaster CG33083-PA
protein.
Length = 423
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 212 VFVVLQSLHYANGGCMMILWGAIIFLRLLVFYCPLID-TKLILPLKNSYTTRQ 57
+F VL SL + MI+W A I+ L + +CPLI LIL + S + Q
Sbjct: 135 LFKVLDSLDIS----AMIVWRAFIYGLLKIVFCPLITYITLILYHRRSISESQ 183
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 240 NRNPSAIDVSFCSAPITPLCEWWVHDDSMGSYH 142
+R S IDV+F S + W VH+D S H
Sbjct: 168 DRGTSFIDVTFVSRVLVAGSNWMVHEDITLSDH 200
>AE013599-2320|AAF57972.2| 1302|Drosophila melanogaster CG18471-PA
protein.
Length = 1302
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 332 TKSRGHQLYDLIDEFDLCVLNNGSFTLL 249
TK+ ++ + +DE VLN GSFTLL
Sbjct: 209 TKTLVQKVLEFVDEHGTEVLNLGSFTLL 236
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,343
Number of Sequences: 53049
Number of extensions: 309456
Number of successful extensions: 777
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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