Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0161
         (363 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   1.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   1.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   1.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   3.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   7.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    20   7.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 163 IMHPPFA*WSDW 198
           I  PP A W+DW
Sbjct: 167 ISSPPLAGWNDW 178


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 163 IMHPPFA*WSDW 198
           I  PP A W+DW
Sbjct: 167 ISSPPLAGWNDW 178


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 163 IMHPPFA*WSDW 198
           I  PP A W+DW
Sbjct: 167 ISSPPLAGWNDW 178


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 177 WWVHDDSMGSYHFPTLTRVLLSVDRY 100
           W + D +   +H+PT    LL  + Y
Sbjct: 786 WMIIDPAKAMHHYPTREDNLLVCNSY 811



 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 185 SGVIGALQKLTSI 223
           SGV+GA   +TSI
Sbjct: 213 SGVVGAASSVTSI 225


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 225 AIDVSFCSAPITPLC 181
           A+DV  C+A I  LC
Sbjct: 143 AVDVWMCTASILNLC 157


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 266 GSFTLLIILTEIHRLLMSVFVV 201
           G FT+LII+T +   L+   V+
Sbjct: 42  GLFTMLIIVTIVGNTLVIAAVI 63


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 146 IIFLRLLVFYCP 111
           I FL +LVFY P
Sbjct: 263 ITFLTVLVFYLP 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,936
Number of Sequences: 438
Number of extensions: 2193
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)