Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0158
         (691 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0203 - 14828009-14828110,14828171-14828269,14828375-148284...    30   1.5  
01_06_1539 + 38107108-38109649,38110563-38110915                       28   6.1  

>11_04_0203 -
           14828009-14828110,14828171-14828269,14828375-14828461,
           14828733-14829111,14829214-14829377,14829544-14829636,
           14829843-14829989,14830065-14830166,14830392-14830490,
           14830669-14830803,14830928-14831006,14831111-14831186,
           14831281-14831370,14831723-14831798,14831880-14831914,
           14832303-14832377,14832468-14832840
          Length = 736

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 235 EYDIDKSGLVRPHLSLMNHFCVRSYFL 315
           EYD D SG  RP  ++ N  CV   FL
Sbjct: 111 EYDADTSGAARPPGNVQNRMCVHPKFL 137


>01_06_1539 + 38107108-38109649,38110563-38110915
          Length = 964

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 7/32 (21%)
 Frame = -2

Query: 597 IDYNRNSLCGIFP-------NMWKREYHDRNL 523
           +D++RN + G+FP       N+WK E +  NL
Sbjct: 217 LDFSRNQIIGVFPIAISNLRNLWKIELYQNNL 248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,355,176
Number of Sequences: 37544
Number of extensions: 267377
Number of successful extensions: 480
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)