Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0158
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132943-12|CAB81978.3|  514|Caenorhabditis elegans Hypothetical...    31   0.78 
Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical...    27   9.6  

>AL132943-12|CAB81978.3|  514|Caenorhabditis elegans Hypothetical
           protein Y116F11B.9a protein.
          Length = 514

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 15  PSYKPQRITV*KQILYVFPQ*TNFLKYIH 101
           PSYKP+   V    LYVF Q  NFL  +H
Sbjct: 160 PSYKPRDFVVCLSPLYVFEQWQNFLLSVH 188


>Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical
           protein T06D8.2 protein.
          Length = 708

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 361 KVCYFLNFWVHKDKEDFINNLNSYLGTXXXXXFSKHLTS 477
           ++C  L   V +   D INNL S +G      F K+L S
Sbjct: 100 EICSMLLLSVSEAHADVINNLESLVGLVDVKLFGKYLPS 138


>AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical
           protein Y38H6C.17 protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = -2

Query: 312 KVRSNTEMIH*RKMRPYQTRLINVVLVLNHQLSLANMTKFL 190
           KV  N ++IH  K+ PY  RL  +++ L+  L++ N+T+ +
Sbjct: 344 KVSENRKLIH--KILPYALRLSLMLVSLSLALAVPNLTEII 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,377,455
Number of Sequences: 27780
Number of extensions: 278985
Number of successful extensions: 703
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)