Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0157
(537 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0041 - 25120961-25121005,25121143-25121194,25121429-251214... 30 1.0
03_06_0150 - 31995337-31995427,31995535-31995833 30 1.0
12_01_0454 + 3580332-3581714 30 1.3
02_05_0015 - 24992253-24993993,24995331-24995695 29 1.8
02_02_0205 + 7769137-7770153 29 1.8
07_01_1139 - 10684647-10685837,10685877-10686251,10686351-106865... 29 3.1
03_06_0499 - 34354040-34354528 29 3.1
03_05_0612 + 26117306-26118045,26118151-26118680,26119247-261192... 29 3.1
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873... 29 3.1
03_02_0468 - 8712707-8713162,8713551-8713631,8713933-8714031 29 3.1
12_02_0616 - 21246374-21246462,21246605-21247702,21247800-212481... 28 4.1
01_01_1189 + 9454042-9455655 28 4.1
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 28 5.4
08_02_0044 + 11556938-11557921 28 5.4
04_03_1022 - 21778315-21779007 28 5.4
11_01_0106 - 792190-792730,793905-794018,794206-794540 27 7.2
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 27 7.2
07_01_0036 + 298626-299573,299973-300239 27 9.5
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 27 9.5
02_05_0019 - 25025218-25026964,25027084-25027478 27 9.5
01_01_0727 - 5675215-5675277,5675523-5675621,5676645-5676782,567... 27 9.5
>05_06_0041 -
25120961-25121005,25121143-25121194,25121429-25121496,
25122167-25122220,25122473-25122541,25122655-25122714,
25122876-25123048,25123847-25123920,25124472-25124585,
25124688-25124754,25124840-25124904,25125504-25125583,
25125689-25125733,25126235-25126300,25126746-25126901,
25127292-25127516,25127630-25127672,25127997-25128040,
25128191-25128263,25130335-25130414
Length = 550
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 169 FWYSLVGCNVFILFHLPSINRETVFPWL 86
F Y ++ C+ FIL H N T++PW+
Sbjct: 301 FSYYMMICSSFILNHTQETNEWTIYPWI 328
>03_06_0150 - 31995337-31995427,31995535-31995833
Length = 129
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +3
Query: 141 TLQPTRLYQNLIQNSGRPKRTSANRRRRYLPTAPKRNYEEGRRGQNHNPGGHVRCEICRR 320
T++ T + + +R RRRR + T N GRRG++ V R
Sbjct: 9 TVRDTEAGNSSDDEGEKRRRRRRRRRRRTISTPTGDNCIRGRRGEDSGETETVGARQATR 68
Query: 321 GPQEW*R 341
G EW R
Sbjct: 69 GEPEWKR 75
>12_01_0454 + 3580332-3581714
Length = 460
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -3
Query: 490 PGEHAQPGHPEQHETATNASSPRRDRQHTSVPPLSSSQ*IAVY*HRVQSSRHHSCG 323
P QP PE+ + +A +R+R H S PL + + + R + H CG
Sbjct: 263 PEGEEQPPQPERRYSCPHAGC-KRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCG 317
>02_05_0015 - 24992253-24993993,24995331-24995695
Length = 701
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 304 AKYVVGDHRNGDAKIELDANKRQFTGMTREEVLKYADDPFWVNLRWSLFRVVLGGLAVHA 483
AK V+ + GD + K T + RE V YADDP N + L + + L HA
Sbjct: 531 AKKVLTMNPTGDLSSARFSEKNLLTAIDREAVFSYADDPCSAN--YPLMQKLRAVLVEHA 588
>02_02_0205 + 7769137-7770153
Length = 338
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 420 LLGELALVAVSCCSGWPGCACSPGLLQSLFA 512
LLG L LVAVSC G+ G + GL +A
Sbjct: 13 LLGALLLVAVSCHGGFGGVGVAEGLSTRYYA 43
>07_01_1139 -
10684647-10685837,10685877-10686251,10686351-10686534,
10686699-10686895
Length = 648
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 108 RLMEGK*KRMNTLQPTRLYQNLIQNSGRPKRTSANRRRRYLPTAPKRNYEEGRRGQNHNP 287
R M+ ++ T+ R ++ +++S RP+ S R LP +R Y GRR P
Sbjct: 586 RFMQNFLEKETTMPRNRYWKKPVKSSNRPRGQSRQLRGSRLPHQSQRRY--GRRSP-RRP 642
Query: 288 GGHVR 302
H+R
Sbjct: 643 LHHLR 647
>03_06_0499 - 34354040-34354528
Length = 162
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 DDERGGTEVC*RSLLGELALVAVSCCSGWPGCACS-PGLLQSLFAHPS-CGPA 533
+ ERGG RSL + A A CC GC S P Q + A P+ C PA
Sbjct: 78 EGERGGEA---RSLAAKGAAAAWPCCDNCGGCTKSIPPQCQCMDARPAGCHPA 127
>03_05_0612 +
26117306-26118045,26118151-26118680,26119247-26119278,
26119910-26121175
Length = 855
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 513 ARTMTAIAPASMHSQATQNNTKQRPTQVHPEGIV-SILQYL 394
+ T T +A H +NNTK VHP+ +V IL Y+
Sbjct: 632 SHTNTLLAVTFWHIWEARNNTKNNNGTVHPQRVVIKILSYV 672
>03_02_0472 -
8737955-8738580,8738704-8738767,8739090-8739239,
8739311-8739422,8739686-8739708
Length = 324
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 210 NRRRRYLPTAPKRNYEEGRRGQNHNPGG 293
NRRR Y P +R+Y R Q+++P G
Sbjct: 160 NRRRSYSPYERRRSYSPHERRQSYSPYG 187
>03_02_0468 - 8712707-8713162,8713551-8713631,8713933-8714031
Length = 211
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 277 IITRVDMSDAKYVVGDHRNGDAKIELDANKRQFTGMTREEVLKYADDPFWVNLRWSLFRV 456
+IT ++ K + DHR G + I+LDA+ F M V ++ W W R
Sbjct: 110 LITALEARKKKVIWHDHRKGASSIDLDAD-ALFGLMINVPVRRFRG--LWTGRHWVAIRS 166
Query: 457 VLG 465
+ G
Sbjct: 167 ING 169
>12_02_0616 -
21246374-21246462,21246605-21247702,21247800-21248110,
21248550-21249251,21252802-21252912,21253396-21253481,
21253753-21253862,21254085-21254236,21254656-21254765
Length = 922
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -2
Query: 446 SDQRKFTQKGSSAYFSTSSLVIPVNCRLLAS---SSIFASPFLWSPTTYFASDMSTRVMI 276
SD+ +KGS FS + +NC + S + P+L + +AS++S M
Sbjct: 135 SDRHHVIRKGSMIRFSVKRVDTEMNCHITGSLLPPHTGSMPWLSTHDAEYASEISRLFMS 194
Query: 275 LASSSFFIVSL 243
+ + F +SL
Sbjct: 195 ILMNLFVFLSL 205
>01_01_1189 + 9454042-9455655
Length = 537
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 214 EGEDICRRRRRETMKKEDEAKIITRVDMSDAKYVVGDHRNG 336
+ ED+ + M KEDE ++ VD D GDH+ G
Sbjct: 358 QAEDVRTKLVTRAMSKEDEEELSWDVDDDDEDDDNGDHKEG 398
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 208 QIEGEDICRRRRRETMKKEDEAKIITRVDMSDAK---YVVGDHRNG 336
++ G+D RRRR+E M K DE R D D + Y D R G
Sbjct: 322 EVSGDDEPRRRRQE-MPKHDEYSRRGRSDADDRRGRHYTPSDDRRG 366
>08_02_0044 + 11556938-11557921
Length = 327
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +2
Query: 74 LTMSEPRKNRLSI--DGGQVKEDEHVA-TYKAIPESDTEFRSSKTNLGKSKEKISADGAE 244
LT +P +N ++ + Q +E+E A T PESDT ++ + +E+ + G
Sbjct: 159 LTPPQPEENNTAVVVEQQQEEEEEEAAVTTPPQPESDTAVAVAEQQQQQEEEETAGPGGR 218
Query: 245 EKL*RRKTRPKS*PGWTCPMRNMSSGTTGMVTRRLNS 355
+K +K + +S G + ++ G ++ R +S
Sbjct: 219 KK---KKKKGRSHGGLPVTLVHLRGGMKRLLLTRWDS 252
>04_03_1022 - 21778315-21779007
Length = 230
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 493 SPGEHAQPGHPEQHETATNASSP-RRDRQHTSVPP 392
+PG + P HP H T A +P H VPP
Sbjct: 80 APGPYIPPHHPHHHHPPTPAPAPSTTPGGHGGVPP 114
>11_01_0106 - 792190-792730,793905-794018,794206-794540
Length = 329
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 232 RRRRRETMKKEDEAKIITRVDMSDAKYVVGDHRNGDAK 345
RR R+ + D K++ + D D + V+ DH + +AK
Sbjct: 67 RRGRKRVNRDNDNVKLLLQAD-DDQEAVIADHGDANAK 103
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 208 QIEGEDICRRRRRETMKKEDEAKIITRVDMSDAK 309
++E E +RR+ +KE E K ++V +DAK
Sbjct: 134 EMEAESAAPKRRKRKKEKEKERKTTSKVAEADAK 167
>07_01_0036 + 298626-299573,299973-300239
Length = 404
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 365 LLASSSIFASPFLWSPTTYFASDMSTRVMILAS 267
+L SSSI +P + T Y +D S+ +ILAS
Sbjct: 371 VLGSSSISINPDQFGVTDYLGNDWSSTQLILAS 403
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 526 PQLGCANNDCNSPGEHAQPGHPEQHETATNASSPRRDRQHTS 401
P+ G + + +S AQP PE H + +SP + H S
Sbjct: 60 PEGGGSTSSSSSSSSSAQPLLPESHRVSLRVTSPYGNSLHYS 101
>02_05_0019 - 25025218-25026964,25027084-25027478
Length = 713
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 295 MSDAKYVVGDHRNGDAKIELDANKRQFTGMTREEVLKYADDP 420
M+ AK + + GD + K + RE V YADDP
Sbjct: 538 MTVAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDP 579
>01_01_0727 -
5675215-5675277,5675523-5675621,5676645-5676782,
5676878-5676995,5678177-5678520
Length = 253
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 220 LLRFAEVRFGRPEFCIRFWYSLVGCNVFILFHLPSINRETVFPWLRHR 77
+++ A RFG + W S LF PS+ R TVF R R
Sbjct: 98 VVKGAAERFGHDHQVVAKWLSGSDLKKVALFGCPSVERRTVFASKRLR 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,031,382
Number of Sequences: 37544
Number of extensions: 406229
Number of successful extensions: 1395
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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