Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0157
(537 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15020.1 68418.m01761 paired amphipathic helix repeat-contain... 30 0.85
At3g59870.1 68416.m06681 expressed protein hypothetical protein ... 30 0.85
At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to vil... 29 1.5
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 29 2.0
At2g38470.1 68415.m04725 WRKY family transcription factor contai... 29 2.6
At4g29920.1 68417.m04257 heat shock protein-related contains sim... 28 3.4
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 28 3.4
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 28 3.4
At5g56120.1 68418.m07001 expressed protein similar to unknown pr... 28 4.5
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 28 4.5
At1g53460.1 68414.m06060 expressed protein 27 6.0
At1g27870.1 68414.m03415 hypothetical protein 27 6.0
At5g66710.1 68418.m08409 protein kinase, putative similar to pro... 27 7.9
At5g49730.1 68418.m06158 ferric reductase-like transmembrane com... 27 7.9
At5g49340.1 68418.m06105 expressed protein similar to unknown pr... 27 7.9
At5g36860.1 68418.m04416 Ulp1 protease family protein contains P... 27 7.9
At5g36740.1 68418.m04402 PHD finger family protein 27 7.9
At5g36670.1 68418.m04388 PHD finger family protein 27 7.9
At5g25430.1 68418.m03019 anion exchange protein family contains ... 27 7.9
At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing pro... 27 7.9
At2g24080.1 68415.m02876 F-box family protein-related similar to... 27 7.9
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 27 7.9
At1g27780.1 68414.m03399 Ulp1 protease family protein similar to... 27 7.9
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 27 7.9
>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1377
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 232 RRRRRETMKKEDEAKIITRVDMSDAKYVVGDHRNGDAKIELDANKRQ 372
RRR R + D + R D++D K +V HR+ +++ D +R+
Sbjct: 236 RRRERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDNRERR 282
>At3g59870.1 68416.m06681 expressed protein hypothetical protein
F6E13.7 - Arabidopsis thaliana, PIR:T00674
Length = 288
Score = 30.3 bits (65), Expect = 0.85
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 392 SLVIPVNCRL-LASSSIFASPFLW-SPTTYFASDMSTRVMILASSSFFIVSLRRRR-QIS 222
S +P+ L L ++S+ SPF +P Y S+ S SF + S+RRRR + S
Sbjct: 2 SSALPLKLLLPLTTTSLLPSPFRSDNPNFYRRRSSSSTSCSSQSQSFQLFSVRRRRSRSS 61
Query: 221 SPSI 210
SPSI
Sbjct: 62 SPSI 65
>At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to villin 2
(VLN2) [Arabidopsis thaliana] GI:3415115
Length = 976
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -1
Query: 519 LGARTMTAIAPASMHSQATQNNTKQRPTQVHPEGIVSILQYLLSRHPSELPFISIEFNLR 340
L A+ ++PA+ ++A Q +Q +++ P G + L R SE P I+F R
Sbjct: 881 LEAKEEEEVSPAADETEAKQETEEQGDSEIQPSGATFTYEQL--RAKSENPVTGIDFKRR 938
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 223 DICRRRRRETMKKEDEAKIITRVDMSD 303
D C+ RR+TMK +D K + +D S+
Sbjct: 60 DFCKDARRQTMKADDVFKALEEMDFSE 86
>At2g38470.1 68415.m04725 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain;
Length = 519
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -2
Query: 425 QKGSSAYFSTSSLVIPVNCRLLASSSIFASPFLWSPTTYFASDMSTRVMILASSS 261
Q G ++ S L IP R A SSI SP L SP+T F+ + SSS
Sbjct: 26 QSGRTSTSSLEDLEIP-KFRSFAPSSISISPSLVSPSTCFSPSLFLDSPAFVSSS 79
>At4g29920.1 68417.m04257 heat shock protein-related contains
similarity to heat shock protein 101 [Triticum aestivum]
gi|6013196|gb|AAF01280
Length = 1017
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 205 RQIEGEDICRRRRRETMKKEDEAKIITRVDMSDAKYV 315
R + + C + KKE+ +I RVD++DA+++
Sbjct: 715 RTSKASEACEELKNALKKKEEVVILIERVDLADAQFM 751
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 104 LSIDGGQVKEDEHVATYKAIPESDTEFRSSKTNLGKSKEKISADGAEEK 250
L IDG Q +EDE V Y +P+ + +T+L K K +A G K
Sbjct: 386 LLIDGHQWQEDEWVGGYARVPKQSRPPQLEETHL---KRKRNAPGPSPK 431
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 104 LSIDGGQVKEDEHVATYKAIPESDTEFRSSKTNLGKSKEKISADGAEEK 250
L IDG Q +EDE V Y +P+ + +T+L K K +A G K
Sbjct: 386 LLIDGHQWQEDEWVGGYARVPKQSRPPQLEETHL---KRKRNAPGPSPK 431
>At5g56120.1 68418.m07001 expressed protein similar to unknown
protein (dbj|BAA81760.1)
Length = 236
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 380 PVNCRLLASSSIFASPFLWSPTTYFASDMSTRVMILASSSFFIVS 246
P++ + + SSS+ W P T+F+ + T V++ ++ FF VS
Sbjct: 188 PMSGKRMKSSSV---EIKWKPVTWFSQYLITIVLLCSAGLFFPVS 229
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 220 EDICRRRRRETMKKEDEAKIITRVDMSDAKYVVGDHRNGDAKIEL 354
E +CR K+ ++ I+T D AK VVG N +E+
Sbjct: 236 EALCREATISASKRSSDSLILTSQDFKIAKSVVGPSINRGITVEI 280
>At1g53460.1 68414.m06060 expressed protein
Length = 314
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 217 LRFAEVRFGRPEFCIRFWYSLVGCNVFILFHLPSINRETVF 95
++FA RFG+ I W S +LF PS+ + VF
Sbjct: 183 VKFAAERFGKDYQEIAKWLSGSDLKKIVLFGCPSLEKRAVF 223
>At1g27870.1 68414.m03415 hypothetical protein
Length = 213
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 85 GATEKPSLD*WRASERG*TRCNLQG 159
G E+ + D WR ERG +CN G
Sbjct: 42 GVREEDNHDRWRRPERGWIKCNFDG 66
>At5g66710.1 68418.m08409 protein kinase, putative similar to
protein kinase ATN1 GP|1054633 [Arabidopsis thaliana]
Length = 405
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -1
Query: 447 QRPTQVH-PEGIVSILQYLLSRHPSELP-FISIEFNL 343
QRP+ + PEG+VSILQ + +P P F I ++L
Sbjct: 294 QRPSVENLPEGVVSILQSCWAENPDARPEFKEITYSL 330
>At5g49730.1 68418.m06158 ferric reductase-like transmembrane
component family protein similar to ferric-chelate
reductase (FRO1) [Pisum sativum] GI:15341529; contains
Pfam profile PF01794: Ferric reductase like
transmembrane componenent
Length = 738
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 131 LSLALHQSRDGFSVAPTSLIVYYTLKTSFSL 39
LS LH+ RDG + P+ ++V + +K S L
Sbjct: 468 LSDILHRKRDGKACLPSKVLVVWAIKNSDEL 498
>At5g49340.1 68418.m06105 expressed protein similar to unknown
protein (emb|CAB82953.1)
Length = 457
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -2
Query: 404 FSTSSLVIPVNCRLLASSSIFASPFLW----SPTTYFASDMSTR 285
FS S +V RLL +++ F+SP + S TT F S +S R
Sbjct: 40 FSPSLIVSSFTSRLLTAANFFSSPSSYTSSASDTTMFLSSVSPR 83
>At5g36860.1 68418.m04416 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1204
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 104 LSIDGGQVKEDEHVATYKAIPESDTEFRSSKTNLGKSKEKISADGAEEK 250
L IDG Q +EDE V Y +P+ + +T++ K K +A G K
Sbjct: 386 LLIDGHQWQEDEWVGGYARVPKQSRPPQLEETDV---KRKRNAPGPSPK 431
>At5g36740.1 68418.m04402 PHD finger family protein
Length = 1179
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 122 QVKEDEHVATYKA-IPES--DTEFRSSKTNLGKSKEKISADGAEEKL*RRKTRPK 277
+VKE+ K+ +PE +FRS +SK+ S DG EEK+ R++ RP+
Sbjct: 98 EVKEEVKQECVKSLVPEEIRGDDFRSEVKV--ESKDDRSDDGKEEKVQRKRGRPR 150
>At5g36670.1 68418.m04388 PHD finger family protein
Length = 1193
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 122 QVKEDEHVATYKA-IPES--DTEFRSSKTNLGKSKEKISADGAEEKL*RRKTRPK 277
+VKE+ K+ +PE +FRS +SK+ S DG EEK+ R++ RP+
Sbjct: 98 EVKEEVKQECVKSLVPEEIRGDDFRSEVKV--ESKDDRSDDGKEEKVQRKRGRPR 150
>At5g25430.1 68418.m03019 anion exchange protein family contains
similarity to SWISS-PROT:P02730 anion transport protein
(Anion exchange protein 1) [Human]{Homo sapiens}
Length = 641
Score = 27.1 bits (57), Expect = 7.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 437 VGRCFVLFWVAWLCMLAGAIAVIV 508
+GR L WVAW+C+ + +++
Sbjct: 88 IGRELYLAWVAWVCVWTSVLLILL 111
>At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing
protein similar to meiotic asynaptic mutant 1
[Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica
oleracea var. alboglabra] GI:23506946; contains Pfam
profile PF02301: HORMA domain
Length = 1399
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 182 FRSSKTNLGKSKEKISADGAEEKL*RRKTRPKS*P 286
F KT +SK K++ + EEKL + PKS P
Sbjct: 477 FVQPKTRSSESKPKVTMEELEEKLTPPSSEPKSAP 511
>At2g24080.1 68415.m02876 F-box family protein-related similar to
F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]
Length = 374
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 322 DHRNGDAKIELDANKRQFTGMTREEVLKYADDPFWVNLR 438
D +NGD + + QF G ++ L Y D P V++R
Sbjct: 136 DDKNGDFVVVWQFEQGQFLGFCKKGDLHYRDIPIRVDVR 174
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 104 LSIDGGQVKEDEHVATYKAIPESDTEFRSSKTNLGKSKEKISADGAEEK 250
L IDG Q +EDE V Y +P+ + +T++ K K +A G K
Sbjct: 366 LLIDGHQWQEDEWVGGYARVPKQSRPPQLEETDV---KRKRNAPGPSPK 411
>At1g27780.1 68414.m03399 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At5g36850, At3g42730, At1g52020,
At3g24390, At4g05280, At1g25886, At4g03300; contains
Pfam profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1468
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 104 LSIDGGQVKEDEHVATYKAIPESDTEFRSSKTNLGKSKEKISADGAEEK 250
L IDG Q +EDE V Y +P+ + +T++ K K +A G K
Sbjct: 384 LLIDGHQWQEDEWVGGYARVPKQSRPPQLEETDV---KRKRNAPGPSPK 429
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 104 LSIDGGQVKEDEHVATYKAIPESDTEFRSSKTNLGKSKEKISADGAEEK 250
L IDG Q +EDE V Y +P+ + +T++ K K +A G K
Sbjct: 353 LLIDGHQWQEDEWVGGYARVPKQSRPPQLEETDV---KRKRNAPGPSPK 398
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,280,797
Number of Sequences: 28952
Number of extensions: 308429
Number of successful extensions: 1153
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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