Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0156
         (644 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0904 + 25832026-25832643                                        102   3e-22
11_08_0073 - 28155156-28155296,28155422-28155682,28155858-281559...    53   2e-07
07_01_0908 + 7653813-7653849,7655220-7655350,7655946-7656020,765...    51   7e-07
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916     31   0.59 
04_03_0643 + 18328807-18331969,18332560-18332627                       28   7.3  

>06_03_0904 + 25832026-25832643
          Length = 205

 Score =  102 bits (244), Expect = 3e-22
 Identities = 45/103 (43%), Positives = 75/103 (72%)
 Frame = +3

Query: 294 AIQKGNMEGARIHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKA 473
           AI+KGNM+GARI+AENAIR++ + +NYLR+++R+DAV +R+ T    + +  SMA +VK+
Sbjct: 42  AIEKGNMDGARIYAENAIRKRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKS 101

Query: 474 MDAAMKFNELREISTLMDKFESQFEDLDVQSSYIGGMRCSQTT 602
           +D+A+    L+++S  MD FE QF +++VQ+ ++ G     T+
Sbjct: 102 LDSALATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTS 144


>11_08_0073 -
           28155156-28155296,28155422-28155682,28155858-28155962,
           28156563-28156693,28156905-28156941
          Length = 224

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 27/90 (30%), Positives = 51/90 (56%)
 Frame = +3

Query: 300 QKGNMEGARIHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMD 479
           ++G M   +I A++ IR ++Q   +  + +++  VS R+QT  +T+ +  +M GV KAM 
Sbjct: 52  KQGQMGAVKIMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMR 111

Query: 480 AAMKFNELREISTLMDKFESQFEDLDVQSS 569
              +   L  +  +M +FE Q E +++ SS
Sbjct: 112 QMNRQMNLPALQKIMREFEIQNEKMEIVSS 141


>07_01_0908 +
           7653813-7653849,7655220-7655350,7655946-7656020,
           7657007-7657111,7657648-7657911,7658474-7658614
          Length = 250

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 28/91 (30%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = +3

Query: 309 NMEGA-RIHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAA 485
           N +GA ++ A++ IR ++Q   + ++ +++  VS RVQT  +T+ + ++M GV KAM   
Sbjct: 79  NGQGAVKVMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDAMKGVTKAMGQM 138

Query: 486 MKFNELREISTLMDKFESQFEDLDVQSSYIG 578
            +   L  +  +M +FE Q E +++ S  +G
Sbjct: 139 NRQLNLPGLQRIMMEFERQNERMEMTSEVMG 169


>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
          Length = 722

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
 Frame = +3

Query: 303 KGNMEGARIHAENAIRQKNQA---LNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKA 473
           +G +EG R    NAI+ + +A   +   +  A++  +   +    +  K   SM+ V+K 
Sbjct: 285 EGAVEGLRADVANAIKARREADGLVGEWKKKAQLFEIKLELANQSSILK-AESMSSVMKE 343

Query: 474 MDAAMKFNELRE--ISTLMDKFES 539
           +DAA    +++E  I+ L DK ES
Sbjct: 344 LDAANALLQVKESQIALLHDKIES 367


>04_03_0643 + 18328807-18331969,18332560-18332627
          Length = 1076

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 514 LH*WTSSRVSLRIWMSSRPTLE 579
           +H W  + + L++WMS+ P+LE
Sbjct: 857 IHCWFLTSIPLQVWMSNLPSLE 878


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,866,348
Number of Sequences: 37544
Number of extensions: 211492
Number of successful extensions: 419
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)