Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0154
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.5  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   3.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 385 LGHWYWHLLALPF 347
           L HW+WHL+  PF
Sbjct: 205 LHHWHWHLV-YPF 216


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 385 LGHWYWHLLALPF 347
           L HW+WHL+  PF
Sbjct: 205 LHHWHWHLV-YPF 216


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 440 LMWTKYTISWMILLNNTT 493
           L+W  + +++M+  NNTT
Sbjct: 143 LLWISFFLNFMLHCNNTT 160


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 242 VSWLSVLLNRSSFPKTLA 189
           +SW+S  LNR++ P  +A
Sbjct: 84  ISWVSFWLNRNATPARVA 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,191
Number of Sequences: 336
Number of extensions: 2631
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)