Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0154
(588 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_55696| Best HMM Match : SNF7 (HMM E-Value=0) 91 5e-19
SB_55695| Best HMM Match : SNF7 (HMM E-Value=0) 91 5e-19
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 32 0.40
SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_35430| Best HMM Match : Vicilin_N (HMM E-Value=0.43) 30 1.2
SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_35902| Best HMM Match : DUF567 (HMM E-Value=9.7) 30 1.6
SB_26672| Best HMM Match : Exo_endo_phos (HMM E-Value=0.46) 28 6.5
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 28 6.5
SB_52524| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 99.1 bits (236), Expect = 2e-21
Identities = 47/72 (65%), Positives = 57/72 (79%)
Frame = +1
Query: 298 EKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDI 477
EKQL QIDGTL+ IE QREALEGANTN +VL M AA A+K AH+ +DVD VHD+MDDI
Sbjct: 72 EKQLNQIDGTLSTIEFQREALEGANTNTEVLKNMSYAAKALKAAHQQLDVDDVHDMMDDI 131
Query: 478 AEQHDISREITR 513
EQ +++ EI+R
Sbjct: 132 QEQTELADEISR 143
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 131 PTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPL 271
PTT EAIQKLR TEELL KK +FLEKKI+ E+Q A+++ +K K L
Sbjct: 16 PTTQEAIQKLRSTEELLQKKSDFLEKKIENELQIAKQNASKNKRTAL 62
>SB_55696| Best HMM Match : SNF7 (HMM E-Value=0)
Length = 225
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/72 (56%), Positives = 57/72 (79%)
Frame = +1
Query: 298 EKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDI 477
EKQL+QIDGTL+ IE QR+ALE ++TN +V+ +M AANA+K HK +D+D VHD+MDD+
Sbjct: 83 EKQLSQIDGTLSTIEFQRDALENSSTNTEVVKSMSFAANALKEVHKTLDIDDVHDVMDDV 142
Query: 478 AEQHDISREITR 513
EQ +S EI++
Sbjct: 143 QEQAQLSDEISQ 154
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +2
Query: 137 THEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQ 274
T +AI KLRETE+LL KKQE+LE++I++E TA+ + K K + LQ
Sbjct: 29 TQQAIWKLRETEKLLEKKQEYLEQRIEIETNTAKANVKKNKRIALQ 74
>SB_55695| Best HMM Match : SNF7 (HMM E-Value=0)
Length = 225
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/72 (56%), Positives = 57/72 (79%)
Frame = +1
Query: 298 EKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDI 477
EKQL+QIDGTL+ IE QR+ALE ++TN +V+ +M AANA+K HK +D+D VHD+MDD+
Sbjct: 83 EKQLSQIDGTLSTIEFQRDALENSSTNTEVVKSMSFAANALKEVHKTLDIDDVHDVMDDV 142
Query: 478 AEQHDISREITR 513
EQ +S EI++
Sbjct: 143 QEQAQLSDEISQ 154
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +2
Query: 137 THEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQ 274
T +AI KLRETE+LL KKQE+LE++I++E TA+ + K K + LQ
Sbjct: 29 TQQAIWKLRETEKLLEKKQEYLEQRIEIETNTAKANVKKNKRIALQ 74
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 134 TTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQLSSGRRDTRSNLL 313
TT +A + RE E+ I++Q L K+ + + + ++ + + L Q R +TR
Sbjct: 972 TTEQAEARFREKEDRRIQRQAELAKEEEEKKEKEQEREKERERLREQREKEREETRMRAR 1031
Query: 314 K*MGPSLRLRPKGK-R*KVPI 373
G R P+G+ R K P+
Sbjct: 1032 DRSGDRARSPPRGRARSKSPV 1052
>SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 179 LIKKQEFLEKKIDLEVQTARKHGTKTKELPLQLSSGRRDTRSNLLK 316
L+K+Q++LE+K D +++ +K K K+L QL SG D + + K
Sbjct: 65 LLKRQKYLEEKKDRKLK--KKEKQKEKKLKRQLESGDTDPQGPIKK 108
>SB_35430| Best HMM Match : Vicilin_N (HMM E-Value=0.43)
Length = 238
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 140 HEAIQKLRETEELLIKKQEFLEK--KIDLEVQTARKHGT-KTKELPLQLSSGRRD 295
HEA QKLR+ + K+EF+++ K D E + +K T KTK + ++ + D
Sbjct: 37 HEAQQKLRDLTINIKLKEEFIKELVKSDKEAKEMKKRYTEKTKSMRQEVEKAKSD 91
>SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 328 LTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDI-DVDKVHDIMDDIAEQHDISRE 504
LT+I + L + N+Q L + +++ + HK+ ++ ++H ++ H S+E
Sbjct: 117 LTRIHKNSQELTRIHKNSQELTRIHKSSQELTRIHKNSQELTRIHKNSQELTRIHKNSQE 176
Query: 505 ITR 513
+TR
Sbjct: 177 LTR 179
>SB_35902| Best HMM Match : DUF567 (HMM E-Value=9.7)
Length = 205
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 258 FVLVPCFLAVCTSKSIFFSKNSCFLISNSSVSRSFWIASC 139
F + PCF S S+ F SCF + S S F + SC
Sbjct: 102 FQVRPCFRFARVSGSLVFQVRSCFRFARVSGSLVFQVRSC 141
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 258 FVLVPCFLAVCTSKSIFFSKNSCFLISNSSVSRSFWIASC 139
F + PCF S S+ F SCF + S S F + SC
Sbjct: 153 FQVRPCFRFARVSGSLVFQVRSCFRFARVSGSLVFQVRSC 192
>SB_26672| Best HMM Match : Exo_endo_phos (HMM E-Value=0.46)
Length = 1232
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 155 KLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQLSSGRRDTRSNLLK*MGPSL 334
+LR+T+ L + ++F +D E+Q T EL L+ + +DT LK + +L
Sbjct: 377 ELRQTKSLSLTDEQF---PVDEEMQRGCVR-TPVSELTLEARTIAQDTDLEYLKQLKKTL 432
Query: 335 RLRPKGK 355
RL K K
Sbjct: 433 RLASKAK 439
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 131 PTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKEL 265
P+T+E IQK++ + LI+K E + +K +L +Q K + K++
Sbjct: 494 PSTYEMIQKIQTLQRRLIQKTEEVVEK-ELLIQEKEKLYMELKQI 537
>SB_52524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 388 LNTMREAANAMKLAHKDIDVDKVHDIMDDIAE-QHDISREITRRSVTMWPSL 540
++ M AN L H D+DV K I I + +HD S + ++ WPS+
Sbjct: 153 VDMMDRCANTDFLLHYDVDVIKSDAIPSSIEKAEHDTS-QFFGSAIVEWPSV 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,166,409
Number of Sequences: 59808
Number of extensions: 310485
Number of successful extensions: 918
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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