Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0154
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29488-7|AAA68771.1|  221|Caenorhabditis elegans Hypothetical pr...    92   2e-19
U64857-10|AAC25860.1|  265|Caenorhabditis elegans Hypothetical p...    81   4e-16
U23510-6|AAC46784.2|  236|Caenorhabditis elegans Hypothetical pr...    71   5e-13
AF016448-6|AAB65951.1|  217|Caenorhabditis elegans Hypothetical ...    42   2e-04
Z68338-2|CAA92759.1|  411|Caenorhabditis elegans Hypothetical pr...    37   0.012
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AF016414-5|AAG24020.1|  585|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z68880-4|CAA93093.1|  544|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AC024792-6|AAF60686.2|  901|Caenorhabditis elegans Hypothetical ...    27   7.5  
U97189-7|AAK68257.3|  782|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U61953-10|AAK82911.1|  613|Caenorhabditis elegans Hypothetical p...    27   9.9  
U61953-9|AAK82910.1|  748|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U61953-8|AAC48078.1|  746|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U37429-7|AAA79351.2|  218|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>U29488-7|AAA68771.1|  221|Caenorhabditis elegans Hypothetical
           protein C56C10.3 protein.
          Length = 221

 Score = 92.3 bits (219), Expect = 2e-19
 Identities = 41/71 (57%), Positives = 56/71 (78%)
 Frame = +1

Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
           +EKQL  IDG L+ I  QREALE A+TNA+VLN M  A+ A+K AH ++D+D+VHD+M+D
Sbjct: 72  FEKQLAHIDGVLSTIGYQREALENASTNAEVLNVMGTASKALKAAHNNMDIDQVHDLMED 131

Query: 475 IAEQHDISREI 507
           IAEQ +++ EI
Sbjct: 132 IAEQQEVANEI 142



 Score = 64.5 bits (150), Expect = 5e-11
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = +2

Query: 134 TTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQLSSGRRDTRSNL 310
           T  E+IQKLRETEE+L KKQEFLEKK+  E Q A K+GTK K + LQ  + +R+    L
Sbjct: 18  TPQESIQKLRETEEMLEKKQEFLEKKVIDEKQNAVKYGTKNKRMALQCLNRKRNFEKQL 76


>U64857-10|AAC25860.1|  265|Caenorhabditis elegans Hypothetical
           protein C37C3.3 protein.
          Length = 265

 Score = 81.4 bits (192), Expect = 4e-16
 Identities = 36/71 (50%), Positives = 53/71 (74%)
 Frame = +1

Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
           +EKQL  IDG L  +E QRE LE A+TNA+VL  M+ A++A+K  H ++D D+V D+MD+
Sbjct: 121 FEKQLIHIDGVLATLEHQRETLENASTNAEVLTVMKLASDALKAVHNNMDSDQVRDMMDN 180

Query: 475 IAEQHDISREI 507
           I EQ ++++EI
Sbjct: 181 IDEQREVAKEI 191



 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = +2

Query: 134 TTHEAIQKLRETEELLIKKQEFLEKKI-DLEVQTARKHGTKTKELPLQLSSGRRDTRSNL 310
           T  E+IQKLRETE++L KKQEFLEKKI D+  Q A K+GTK K + LQ  S ++     L
Sbjct: 66  TPQESIQKLRETEDILEKKQEFLEKKIDDVRKQNAVKYGTKNKRMALQCLSRKKAFEKQL 125

Query: 311 L 313
           +
Sbjct: 126 I 126


>U23510-6|AAC46784.2|  236|Caenorhabditis elegans Hypothetical
           protein R12C12.5 protein.
          Length = 236

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 30/71 (42%), Positives = 50/71 (70%)
 Frame = +1

Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
           YE++L++IDG LT++EAQR ALE    + +V++ + +    +K  H  +D+DKVHD+MD+
Sbjct: 89  YEQELSRIDGVLTKLEAQRTALENVGMHNEVIDVLGKTTETLKKEHAKMDIDKVHDLMDE 148

Query: 475 IAEQHDISREI 507
           IA+   +S E+
Sbjct: 149 IADGLAMSEEL 159



 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = +2

Query: 131 PTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPL 271
           PT  EAI  LR+ EELLIKKQE+ E +I+ EV++A+K+    K++ L
Sbjct: 34  PTADEAIGNLRDAEELLIKKQEYFELRIEQEVESAKKYMKTNKKMAL 80


>AF016448-6|AAB65951.1|  217|Caenorhabditis elegans Hypothetical
           protein F41E6.9 protein.
          Length = 217

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 17/71 (23%), Positives = 37/71 (52%)
 Frame = +1

Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
           YE Q  Q+D     ++    A++G   N   +  M++    M+  +K +++D++ D+ D 
Sbjct: 74  YENQKGQLDQQAFNMDQSNFAIQGMKDNQVTVAAMKDGLKTMQKEYKKMNIDQIEDLQDQ 133

Query: 475 IAEQHDISREI 507
           + +  D++ EI
Sbjct: 134 MEDMLDMNNEI 144


>Z68338-2|CAA92759.1|  411|Caenorhabditis elegans Hypothetical
           protein T24B8.2 protein.
          Length = 411

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +1

Query: 298 EKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMK--LAHKDIDVDKVHDIMD 471
           EK +   D    ++      +  A  N  VL   +    A K  LA + +  DK+H+ MD
Sbjct: 269 EKDIADKDVQYQKLLTMLHQISSAKNNKDVLQAYKSGTAAFKATLARQGLSPDKIHETMD 328

Query: 472 DIAEQHDISREI 507
           D+    D  +EI
Sbjct: 329 DVVNSMDEYKEI 340


>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
           protein T01E8.3 protein.
          Length = 1299

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 116 FCHRIFSRENSFWKP 72
           FC  +FSRENS W P
Sbjct: 280 FCDFLFSRENSLWDP 294


>AF016414-5|AAG24020.1|  585|Caenorhabditis elegans Hypothetical
           protein D1065.1 protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 489 VLFSNIIHDIVYFVHINVFVCELHGISCLAHSVQYLGIGIGT 364
           V++ NII+ I+YF+H    +  LH    L     + G G GT
Sbjct: 108 VIYPNIINSIIYFLHRRGRIASLH--RWLLEEPVFNGEGAGT 147


>Z68880-4|CAA93093.1|  544|Caenorhabditis elegans Hypothetical
           protein T14G10.7 protein.
          Length = 544

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 131 PTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQ 274
           PT    I+ ++E   L     E L KK+D ++QT+ +HG   + + L+
Sbjct: 307 PTRGFLIKDVQERWALTHSAMEELVKKVDSQLQTSLQHGAVLRFVVLE 354


>AC024792-6|AAF60686.2|  901|Caenorhabditis elegans Hypothetical
           protein Y48G1A.1 protein.
          Length = 901

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 159 SFWIASCVVGPFSSFLPPNIFPRKLILETTYSFLG 55
           SF+   C+   F SF    +FPRKLI E    F G
Sbjct: 64  SFFAKLCISFQFHSF-EDTVFPRKLIFERFSVFCG 97


>U97189-7|AAK68257.3|  782|Caenorhabditis elegans Hypothetical
           protein C48B6.8 protein.
          Length = 782

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 245 HVSWLSVLLNRSSFPKTLAS 186
           H  WL ++ NRSS  +TLAS
Sbjct: 108 HTEWLIIMTNRSSPDETLAS 127


>U61953-10|AAK82911.1|  613|Caenorhabditis elegans Hypothetical
           protein R08C7.10c protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 264 SSFVLVPCFLAVCTSKSIFFSKNSCFLISNSS 169
           S  +L  CF  +  S S+F  KN  FLIS+ S
Sbjct: 428 SILILNRCF-RILESSSVFHKKNQAFLISHRS 458


>U61953-9|AAK82910.1|  748|Caenorhabditis elegans Hypothetical
           protein R08C7.10b protein.
          Length = 748

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 264 SSFVLVPCFLAVCTSKSIFFSKNSCFLISNSS 169
           S  +L  CF  +  S S+F  KN  FLIS+ S
Sbjct: 430 SILILNRCF-RILESSSVFHKKNQAFLISHRS 460


>U61953-8|AAC48078.1|  746|Caenorhabditis elegans Hypothetical
           protein R08C7.10a protein.
          Length = 746

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 264 SSFVLVPCFLAVCTSKSIFFSKNSCFLISNSS 169
           S  +L  CF  +  S S+F  KN  FLIS+ S
Sbjct: 428 SILILNRCF-RILESSSVFHKKNQAFLISHRS 458


>U37429-7|AAA79351.2|  218|Caenorhabditis elegans Hypothetical
           protein F09E5.11 protein.
          Length = 218

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = +2

Query: 134 TTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHG 247
           T H +++  ++TEEL I++++   K++  +V   +K+G
Sbjct: 75  TYHASVEFRKKTEELRIQQEQDSYKRLIRDVDPVQKYG 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,975,488
Number of Sequences: 27780
Number of extensions: 234397
Number of successful extensions: 797
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)