Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0154
(588 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19830.1 68415.m02319 SNF7 family protein contains Pfam domai... 48 5e-06
At4g29160.2 68417.m04173 SNF7 family protein contains Pfam domai... 48 6e-06
At4g29160.1 68417.m04172 SNF7 family protein contains Pfam domai... 48 6e-06
At5g63880.1 68418.m08020 SNF7 family protein contains Pfam domai... 39 0.003
At5g27750.1 68418.m03328 F-box family protein contains F-box dom... 29 3.0
At3g15150.1 68416.m01916 expressed protein 28 5.3
At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family... 28 5.3
At1g30580.1 68414.m03741 expressed protein 28 5.3
At1g22260.1 68414.m02782 expressed protein 28 5.3
At5g46500.1 68418.m05726 expressed protein 27 7.0
At3g20150.1 68416.m02554 kinesin motor family protein contains P... 27 7.0
At3g53180.1 68416.m05860 glutamine synthetase, putative similar ... 27 9.3
At1g22275.1 68414.m02784 expressed protein 27 9.3
>At2g19830.1 68415.m02319 SNF7 family protein contains Pfam domain,
PF03357: SNF7 family
Length = 213
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +1
Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
YE+Q+ Q+ +I Q LEGA + ++ +R A+AMK K ++D V MD+
Sbjct: 70 YEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDE 129
Query: 475 IAEQHDISREI 507
I EQ + ++I
Sbjct: 130 INEQTENMKQI 140
>At4g29160.2 68417.m04173 SNF7 family protein contains Pfam domain,
PF03357: SNF7 family
Length = 192
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1
Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
YE Q+ Q+ +I Q LEGA + ++ +R A+AMK K ++D V MD+
Sbjct: 42 YEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDE 101
Query: 475 IAEQHDISREITRRSVT 525
I EQ + ++I T
Sbjct: 102 INEQTENMKQIQEALAT 118
>At4g29160.1 68417.m04172 SNF7 family protein contains Pfam domain,
PF03357: SNF7 family
Length = 219
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1
Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
YE Q+ Q+ +I Q LEGA + ++ +R A+AMK K ++D V MD+
Sbjct: 69 YEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDE 128
Query: 475 IAEQHDISREITRRSVT 525
I EQ + ++I T
Sbjct: 129 INEQTENMKQIQEALAT 145
>At5g63880.1 68418.m08020 SNF7 family protein contains Pfam domain,
PF03357: SNF7 family
Length = 219
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 298 EKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDI 477
E+ L Q+D + +E Q +E + V ++++ +A+K ++D+D V +MDD
Sbjct: 69 EELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDDVQKLMDDT 128
Query: 478 AE 483
A+
Sbjct: 129 AD 130
>At5g27750.1 68418.m03328 F-box family protein contains F-box domain
Pfam:PF00646
Length = 459
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 165 SRSFWIASCVVGPFSSFLPPNIFPRKLIL 79
S +W C++ P+ F+P N+F K ++
Sbjct: 116 STMYWEEECIMYPYLEFMPLNLFTSKTLV 144
>At3g15150.1 68416.m01916 expressed protein
Length = 249
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 319 DGTLTQIEAQREALEGANTNAQVLNTMREAANAMK----LAHKDIDVDKVHDIMDDIAEQ 486
DG +I Q +L + N+ L +R+A MK K+ DKV D+ + +AE
Sbjct: 8 DGVAGRI--QNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSVAEL 65
Query: 487 HDISREITRRSVTM 528
D+ + RS +
Sbjct: 66 LDLHSDCNHRSTAI 79
>At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 401
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 447 HINVFVCELHGIS-CLAHSVQYLGIG 373
H+N F ELHGI+ C A Y G G
Sbjct: 307 HVNDFCAELHGINLCYAGGAGYHGYG 332
>At1g30580.1 68414.m03741 expressed protein
Length = 394
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 167 TEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQL 277
TEEL +K EF+ KKID ++ ++ K ++ L+L
Sbjct: 151 TEELRLKDIEFVGKKIDDVEKSMKRSNDKQLKIELEL 187
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 334 QIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHD 492
Q+E R E + N Q +N +R + K + + DKV I+ D++ + D
Sbjct: 545 QLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKVEKIIKDLSNKFD 597
>At5g46500.1 68418.m05726 expressed protein
Length = 417
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 310 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAE 483
T + G + +IE E+ + N + + + AA H DID++++ D DDI E
Sbjct: 266 TPVQGLVNEIEHNGES---GDNNVETERSTKHAAQRNYYDHVDIDIEQM-DSDDDIEE 319
>At3g20150.1 68416.m02554 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1114
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 528 HCY*SPRDLTRDVVLFSNIIHDIVYFVHINVFVCELHGISCLAHSVQ 388
HC + L + + ++++ + VH + LH SCL H +Q
Sbjct: 352 HCVEEEKFLKKSLSELGHVVNSLAENVHPGISDRSLHKTSCLTHLLQ 398
>At3g53180.1 68416.m05860 glutamine synthetase, putative similar to
glutamine synthetase (glutamate--ammonia ligase)
[Bacillus subtilis] SWISS-PROT:P12425
Length = 845
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 301 KQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDI 465
+++ Q+ GT +EA E + + ++ +EA + L + +DK HDI
Sbjct: 58 REIAQLYGTEVSLEAVEEHRKTSGLDSFTSKCFKEARISALLIDDGLKLDKKHDI 112
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 334 QIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHD 492
Q+E R E + N Q +N +R + K + + DKV I+ +++ ++D
Sbjct: 545 QLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKVEKIIKELSTKYD 597
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,282,776
Number of Sequences: 28952
Number of extensions: 216396
Number of successful extensions: 611
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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