BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0154 (588 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g19830.1 68415.m02319 SNF7 family protein contains Pfam domai... 48 5e-06 At4g29160.2 68417.m04173 SNF7 family protein contains Pfam domai... 48 6e-06 At4g29160.1 68417.m04172 SNF7 family protein contains Pfam domai... 48 6e-06 At5g63880.1 68418.m08020 SNF7 family protein contains Pfam domai... 39 0.003 At5g27750.1 68418.m03328 F-box family protein contains F-box dom... 29 3.0 At3g15150.1 68416.m01916 expressed protein 28 5.3 At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family... 28 5.3 At1g30580.1 68414.m03741 expressed protein 28 5.3 At1g22260.1 68414.m02782 expressed protein 28 5.3 At5g46500.1 68418.m05726 expressed protein 27 7.0 At3g20150.1 68416.m02554 kinesin motor family protein contains P... 27 7.0 At3g53180.1 68416.m05860 glutamine synthetase, putative similar ... 27 9.3 At1g22275.1 68414.m02784 expressed protein 27 9.3 >At2g19830.1 68415.m02319 SNF7 family protein contains Pfam domain, PF03357: SNF7 family Length = 213 Score = 48.0 bits (109), Expect = 5e-06 Identities = 24/71 (33%), Positives = 39/71 (54%) Frame = +1 Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474 YE+Q+ Q+ +I Q LEGA + ++ +R A+AMK K ++D V MD+ Sbjct: 70 YEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDE 129 Query: 475 IAEQHDISREI 507 I EQ + ++I Sbjct: 130 INEQTENMKQI 140 >At4g29160.2 68417.m04173 SNF7 family protein contains Pfam domain, PF03357: SNF7 family Length = 192 Score = 47.6 bits (108), Expect = 6e-06 Identities = 25/77 (32%), Positives = 39/77 (50%) Frame = +1 Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474 YE Q+ Q+ +I Q LEGA + ++ +R A+AMK K ++D V MD+ Sbjct: 42 YEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDE 101 Query: 475 IAEQHDISREITRRSVT 525 I EQ + ++I T Sbjct: 102 INEQTENMKQIQEALAT 118 >At4g29160.1 68417.m04172 SNF7 family protein contains Pfam domain, PF03357: SNF7 family Length = 219 Score = 47.6 bits (108), Expect = 6e-06 Identities = 25/77 (32%), Positives = 39/77 (50%) Frame = +1 Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474 YE Q+ Q+ +I Q LEGA + ++ +R A+AMK K ++D V MD+ Sbjct: 69 YEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDE 128 Query: 475 IAEQHDISREITRRSVT 525 I EQ + ++I T Sbjct: 129 INEQTENMKQIQEALAT 145 >At5g63880.1 68418.m08020 SNF7 family protein contains Pfam domain, PF03357: SNF7 family Length = 219 Score = 38.7 bits (86), Expect = 0.003 Identities = 17/62 (27%), Positives = 34/62 (54%) Frame = +1 Query: 298 EKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDI 477 E+ L Q+D + +E Q +E + V ++++ +A+K ++D+D V +MDD Sbjct: 69 EELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDDVQKLMDDT 128 Query: 478 AE 483 A+ Sbjct: 129 AD 130 >At5g27750.1 68418.m03328 F-box family protein contains F-box domain Pfam:PF00646 Length = 459 Score = 28.7 bits (61), Expect = 3.0 Identities = 9/29 (31%), Positives = 17/29 (58%) Frame = -1 Query: 165 SRSFWIASCVVGPFSSFLPPNIFPRKLIL 79 S +W C++ P+ F+P N+F K ++ Sbjct: 116 STMYWEEECIMYPYLEFMPLNLFTSKTLV 144 >At3g15150.1 68416.m01916 expressed protein Length = 249 Score = 27.9 bits (59), Expect = 5.3 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +1 Query: 319 DGTLTQIEAQREALEGANTNAQVLNTMREAANAMK----LAHKDIDVDKVHDIMDDIAEQ 486 DG +I Q +L + N+ L +R+A MK K+ DKV D+ + +AE Sbjct: 8 DGVAGRI--QNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSVAEL 65 Query: 487 HDISREITRRSVTM 528 D+ + RS + Sbjct: 66 LDLHSDCNHRSTAI 79 >At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase Length = 401 Score = 27.9 bits (59), Expect = 5.3 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Frame = -1 Query: 447 HINVFVCELHGIS-CLAHSVQYLGIG 373 H+N F ELHGI+ C A Y G G Sbjct: 307 HVNDFCAELHGINLCYAGGAGYHGYG 332 >At1g30580.1 68414.m03741 expressed protein Length = 394 Score = 27.9 bits (59), Expect = 5.3 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +2 Query: 167 TEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQL 277 TEEL +K EF+ KKID ++ ++ K ++ L+L Sbjct: 151 TEELRLKDIEFVGKKIDDVEKSMKRSNDKQLKIELEL 187 >At1g22260.1 68414.m02782 expressed protein Length = 857 Score = 27.9 bits (59), Expect = 5.3 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +1 Query: 334 QIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHD 492 Q+E R E + N Q +N +R + K + + DKV I+ D++ + D Sbjct: 545 QLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKVEKIIKDLSNKFD 597 >At5g46500.1 68418.m05726 expressed protein Length = 417 Score = 27.5 bits (58), Expect = 7.0 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = +1 Query: 310 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAE 483 T + G + +IE E+ + N + + + AA H DID++++ D DDI E Sbjct: 266 TPVQGLVNEIEHNGES---GDNNVETERSTKHAAQRNYYDHVDIDIEQM-DSDDDIEE 319 >At3g20150.1 68416.m02554 kinesin motor family protein contains Pfam domain, PF00225: Kinesin motor domain Length = 1114 Score = 27.5 bits (58), Expect = 7.0 Identities = 12/47 (25%), Positives = 22/47 (46%) Frame = -1 Query: 528 HCY*SPRDLTRDVVLFSNIIHDIVYFVHINVFVCELHGISCLAHSVQ 388 HC + L + + ++++ + VH + LH SCL H +Q Sbjct: 352 HCVEEEKFLKKSLSELGHVVNSLAENVHPGISDRSLHKTSCLTHLLQ 398 >At3g53180.1 68416.m05860 glutamine synthetase, putative similar to glutamine synthetase (glutamate--ammonia ligase) [Bacillus subtilis] SWISS-PROT:P12425 Length = 845 Score = 27.1 bits (57), Expect = 9.3 Identities = 14/55 (25%), Positives = 27/55 (49%) Frame = +1 Query: 301 KQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDI 465 +++ Q+ GT +EA E + + ++ +EA + L + +DK HDI Sbjct: 58 REIAQLYGTEVSLEAVEEHRKTSGLDSFTSKCFKEARISALLIDDGLKLDKKHDI 112 >At1g22275.1 68414.m02784 expressed protein Length = 856 Score = 27.1 bits (57), Expect = 9.3 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 334 QIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHD 492 Q+E R E + N Q +N +R + K + + DKV I+ +++ ++D Sbjct: 545 QLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKVEKIIKELSTKYD 597 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,282,776 Number of Sequences: 28952 Number of extensions: 216396 Number of successful extensions: 611 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 597 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 611 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1161268208 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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