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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0154
         (588 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g19830.1 68415.m02319 SNF7 family protein contains Pfam domai...    48   5e-06
At4g29160.2 68417.m04173 SNF7 family protein contains Pfam domai...    48   6e-06
At4g29160.1 68417.m04172 SNF7 family protein contains Pfam domai...    48   6e-06
At5g63880.1 68418.m08020 SNF7 family protein contains Pfam domai...    39   0.003
At5g27750.1 68418.m03328 F-box family protein contains F-box dom...    29   3.0  
At3g15150.1 68416.m01916 expressed protein                             28   5.3  
At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family...    28   5.3  
At1g30580.1 68414.m03741 expressed protein                             28   5.3  
At1g22260.1 68414.m02782 expressed protein                             28   5.3  
At5g46500.1 68418.m05726 expressed protein                             27   7.0  
At3g20150.1 68416.m02554 kinesin motor family protein contains P...    27   7.0  
At3g53180.1 68416.m05860 glutamine synthetase, putative similar ...    27   9.3  
At1g22275.1 68414.m02784 expressed protein                             27   9.3  

>At2g19830.1 68415.m02319 SNF7 family protein contains Pfam domain,
           PF03357: SNF7 family
          Length = 213

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 24/71 (33%), Positives = 39/71 (54%)
 Frame = +1

Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
           YE+Q+ Q+     +I  Q   LEGA    + ++ +R  A+AMK   K  ++D V   MD+
Sbjct: 70  YEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDE 129

Query: 475 IAEQHDISREI 507
           I EQ +  ++I
Sbjct: 130 INEQTENMKQI 140


>At4g29160.2 68417.m04173 SNF7 family protein contains Pfam domain,
           PF03357: SNF7 family
          Length = 192

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 25/77 (32%), Positives = 39/77 (50%)
 Frame = +1

Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
           YE Q+ Q+     +I  Q   LEGA    + ++ +R  A+AMK   K  ++D V   MD+
Sbjct: 42  YEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDE 101

Query: 475 IAEQHDISREITRRSVT 525
           I EQ +  ++I     T
Sbjct: 102 INEQTENMKQIQEALAT 118


>At4g29160.1 68417.m04172 SNF7 family protein contains Pfam domain,
           PF03357: SNF7 family
          Length = 219

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 25/77 (32%), Positives = 39/77 (50%)
 Frame = +1

Query: 295 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 474
           YE Q+ Q+     +I  Q   LEGA    + ++ +R  A+AMK   K  ++D V   MD+
Sbjct: 69  YEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDE 128

Query: 475 IAEQHDISREITRRSVT 525
           I EQ +  ++I     T
Sbjct: 129 INEQTENMKQIQEALAT 145


>At5g63880.1 68418.m08020 SNF7 family protein contains Pfam domain,
           PF03357: SNF7 family
          Length = 219

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = +1

Query: 298 EKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDI 477
           E+ L Q+D  +  +E Q   +E  +    V  ++++  +A+K    ++D+D V  +MDD 
Sbjct: 69  EELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDDVQKLMDDT 128

Query: 478 AE 483
           A+
Sbjct: 129 AD 130


>At5g27750.1 68418.m03328 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 459

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 165 SRSFWIASCVVGPFSSFLPPNIFPRKLIL 79
           S  +W   C++ P+  F+P N+F  K ++
Sbjct: 116 STMYWEEECIMYPYLEFMPLNLFTSKTLV 144


>At3g15150.1 68416.m01916 expressed protein
          Length = 249

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +1

Query: 319 DGTLTQIEAQREALEGANTNAQVLNTMREAANAMK----LAHKDIDVDKVHDIMDDIAEQ 486
           DG   +I  Q  +L   + N+  L  +R+A   MK       K+   DKV D+ + +AE 
Sbjct: 8   DGVAGRI--QNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSVAEL 65

Query: 487 HDISREITRRSVTM 528
            D+  +   RS  +
Sbjct: 66  LDLHSDCNHRSTAI 79


>At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 401

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -1

Query: 447 HINVFVCELHGIS-CLAHSVQYLGIG 373
           H+N F  ELHGI+ C A    Y G G
Sbjct: 307 HVNDFCAELHGINLCYAGGAGYHGYG 332


>At1g30580.1 68414.m03741 expressed protein
          Length = 394

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 167 TEELLIKKQEFLEKKIDLEVQTARKHGTKTKELPLQL 277
           TEEL +K  EF+ KKID   ++ ++   K  ++ L+L
Sbjct: 151 TEELRLKDIEFVGKKIDDVEKSMKRSNDKQLKIELEL 187


>At1g22260.1 68414.m02782 expressed protein
          Length = 857

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 334 QIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHD 492
           Q+E  R   E +  N Q +N +R   +  K    + + DKV  I+ D++ + D
Sbjct: 545 QLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKVEKIIKDLSNKFD 597


>At5g46500.1 68418.m05726 expressed protein
          Length = 417

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 310 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAE 483
           T + G + +IE   E+    + N +   + + AA      H DID++++ D  DDI E
Sbjct: 266 TPVQGLVNEIEHNGES---GDNNVETERSTKHAAQRNYYDHVDIDIEQM-DSDDDIEE 319


>At3g20150.1 68416.m02554 kinesin motor family protein contains Pfam
           domain, PF00225: Kinesin motor domain
          Length = 1114

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -1

Query: 528 HCY*SPRDLTRDVVLFSNIIHDIVYFVHINVFVCELHGISCLAHSVQ 388
           HC    + L + +    ++++ +   VH  +    LH  SCL H +Q
Sbjct: 352 HCVEEEKFLKKSLSELGHVVNSLAENVHPGISDRSLHKTSCLTHLLQ 398


>At3g53180.1 68416.m05860 glutamine synthetase, putative similar to
           glutamine synthetase (glutamate--ammonia ligase)
           [Bacillus subtilis] SWISS-PROT:P12425
          Length = 845

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +1

Query: 301 KQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDI 465
           +++ Q+ GT   +EA  E  + +  ++      +EA  +  L    + +DK HDI
Sbjct: 58  REIAQLYGTEVSLEAVEEHRKTSGLDSFTSKCFKEARISALLIDDGLKLDKKHDI 112


>At1g22275.1 68414.m02784 expressed protein
          Length = 856

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +1

Query: 334 QIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHD 492
           Q+E  R   E +  N Q +N +R   +  K    + + DKV  I+ +++ ++D
Sbjct: 545 QLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKVEKIIKELSTKYD 597


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,282,776
Number of Sequences: 28952
Number of extensions: 216396
Number of successful extensions: 611
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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