Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0153
         (571 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278...    27   8.0  

>10_07_0176 -
           13826764-13827064,13827271-13827377,13827474-13827836,
           13827912-13828079,13828153-13828374,13828784-13829023,
           13829640-13829719,13829853-13830018,13830720-13830783,
           13830861-13830962,13831085-13831227,13831370-13831474,
           13831551-13831706,13832125-13832241,13832315-13832392,
           13832466-13832550,13833334-13833455,13833546-13833611,
           13835190-13835284,13835427-13835523,13835873-13835983,
           13836083-13836164,13836292-13836353,13836620-13836685,
           13838002-13838232
          Length = 1142

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 181 CQESFKQCLAICEGVVPYGKLIEWKQFHQKLSDSE 285
           C+E F+ CLA+C  V+P G+    K  +Q  S  E
Sbjct: 490 CKEFFR-CLALCHTVLPEGEETPEKISYQAASPDE 523


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,274,155
Number of Sequences: 37544
Number of extensions: 209841
Number of successful extensions: 318
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)