BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0153 (571 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 27 9.5 U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 27 9.5 U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 27 9.5 >U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 2, isoform a protein. Length = 1837 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2 Query: 284 SINKSTSAICSTFFHYINVTNPFLVKISFI*LRKTSLIMLSLC 412 S+ + S +CST HY+ P KISF K ++ L C Sbjct: 682 SLKELMSVLCSTRPHYVRCIKPNDSKISFDFEPKRAIQQLRAC 724 >U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 2, isoform b protein. Length = 1839 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2 Query: 284 SINKSTSAICSTFFHYINVTNPFLVKISFI*LRKTSLIMLSLC 412 S+ + S +CST HY+ P KISF K ++ L C Sbjct: 682 SLKELMSVLCSTRPHYVRCIKPNDSKISFDFEPKRAIQQLRAC 724 >U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. Length = 1839 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2 Query: 284 SINKSTSAICSTFFHYINVTNPFLVKISFI*LRKTSLIMLSLC 412 S+ + S +CST HY+ P KISF K ++ L C Sbjct: 682 SLKELMSVLCSTRPHYVRCIKPNDSKISFDFEPKRAIQQLRAC 724 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,545,404 Number of Sequences: 27780 Number of extensions: 216595 Number of successful extensions: 457 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 455 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 457 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1187327456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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