Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0152
         (567 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SIP9 Cluster: Predicted protein; n=1; Nematostella ve...    47   4e-04
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g...    40   0.031
UniRef50_Q3LG56 Cluster: ORF2-encoded protein; n=4; Bilateria|Re...    33   6.2  
UniRef50_A5EHZ6 Cluster: Putative Acetylornithine deacetylase/Su...    33   6.2  
UniRef50_A7T3Q8 Cluster: Predicted protein; n=3; Nematostella ve...    33   6.2  
UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like p...    32   8.1  

>UniRef50_A7SIP9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 218

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +2

Query: 263 IEMACVELERFIVVSVYRPPDALYDSFENILENVLLKLSVSNKQIFVCGDY--XXXXXXX 436
           IE+ C      IV  +YRPPD  Y+ FE  L N+L +L    K  ++ GD+         
Sbjct: 75  IEVTCRHSPNIIVGVIYRPPDNNYNQFEQSLNNILQQLDKEKKPCYLMGDFNLDLLKHEK 134

Query: 437 XXXXXRFRTLLKSYNLPNLFLEPTGTTTTSGNM 535
                RF   L S +   L  +PT  T+ +  +
Sbjct: 135 SEFPTRFFNQLSSSDFVPLITKPTRLTSHTATL 167


>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
           gambiae|Rep: Reverse transcriptase - Anopheles gambiae
           (African malaria mosquito)
          Length = 1022

 Score = 40.3 bits (90), Expect = 0.031
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = +2

Query: 269 MACVELERFIVVSVYRPPDALYDSFENILENVLLKLSVSNKQIFVCGDY 415
           M  VE+   ++VS Y PP      FE +L+N++L +S S+K + V GD+
Sbjct: 75  MLAVEVGGILIVSAYAPPSWTVQEFEELLDNIVLTVSGSSKFV-VAGDF 122


>UniRef50_Q3LG56 Cluster: ORF2-encoded protein; n=4; Bilateria|Rep:
           ORF2-encoded protein - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 1027

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 15  NLQGLMGKELEIDLFLDFNKVNVLCVTEHWLKK 113
           N++ L  K L I+  +  N +N LC+TE WLK+
Sbjct: 78  NIRSLAPKALIINEIITENNLNALCLTETWLKQ 110


>UniRef50_A5EHZ6 Cluster: Putative Acetylornithine
           deacetylase/Succinyl-diaminopimelate desuccinylase and
           related deacylases; n=1; Bradyrhizobium sp. BTAi1|Rep:
           Putative Acetylornithine
           deacetylase/Succinyl-diaminopimelate desuccinylase and
           related deacylases - Bradyrhizobium sp. (strain BTAi1 /
           ATCC BAA-1182)
          Length = 433

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +2

Query: 254 ERIIEMACVELERFIVVSVYRPPDALYDSFENILENVLLKLSVSNKQIFV 403
           ER+ E A  +L   + V    PP A Y++F +++E + + L++  +++ V
Sbjct: 22  ERLSETAVDDLRSMVAVDTSFPPGAGYEAFADLMEQLAVPLALDCERVIV 71


>UniRef50_A7T3Q8 Cluster: Predicted protein; n=3; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 371

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +2

Query: 242 EPLCERIIEMACVELERFIVVSVYRPPDALYDSFENILENVLLKLSVSNKQIFVCGDY 415
           E LC ++I   C      I+  VYR PD+  +  +  LE ++ K+ ++NK+  + GD+
Sbjct: 202 ELLCTQVIP--CKSNCPIIIAGVYRVPDSTAE-MDAKLEGLIEKMYITNKEALLLGDF 256


>UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like
           protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to pol-like protein - Nasonia vitripennis
          Length = 963

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +3

Query: 3   LVHQNLQGLMGKELEIDLFLDFNKVNVLCVTEHWLKKYELNCNFKNHQVVSSFCRENAIR 182
           ++  N + L GK  E++  L  N  NV C+ E WL   ++    KN   +S   R     
Sbjct: 9   ILQWNCRSLRGKTYELESLL--NNYNVACLQETWLNSQDI-VRLKNFN-ISRIDRLTDTH 64

Query: 183 GGSLI 197
           GG LI
Sbjct: 65  GGGLI 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,455,719
Number of Sequences: 1657284
Number of extensions: 9331297
Number of successful extensions: 20190
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20172
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)