Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0152
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   9.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 242 EPLCERIIE 268
           EPLCER+ E
Sbjct: 238 EPLCERLFE 246


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 237 IVSLSVNGLLKW 272
           IV+L +NGL+ W
Sbjct: 8   IVNLGLNGLIDW 19


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 149 CEFLLQRECYTRWLTD 196
           C FL +  C+ +++TD
Sbjct: 167 CAFLERENCHLKFVTD 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,283
Number of Sequences: 336
Number of extensions: 2731
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)