Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0151
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75954-7|CAB00106.2|  492|Caenorhabditis elegans Hypothetical pr...    97   1e-20
Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical pr...    32   0.30 
AL132860-3|CAB60514.2|  342|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z79756-3|CAB02121.1|  527|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL110479-1|CAB60310.2|  311|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z75954-7|CAB00106.2|  492|Caenorhabditis elegans Hypothetical
           protein F58H1.3a protein.
          Length = 492

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 49/99 (49%), Positives = 68/99 (68%)
 Frame = +2

Query: 335 KEDQIEGLVKNVKWQMSSDRKVAPLKQLQGLIWKKGYDKGDIKGHVYXDVLPALEQWRQ* 514
           +++ IE + KNV+  +  D+K+ P+K LQGLIW++ Y +GD+KGHVY DVLP L+     
Sbjct: 78  RKECIEDVTKNVRHWIKRDKKLTPMKALQGLIWEEAYQRGDVKGHVYPDVLPVLKIVENR 137

Query: 515 RVRKIYIYSSGSVQAQKLLFGPVICWGTTFLSIDGHFDT 631
           ++  IYIYSSGSV AQKLLF   I    T + + G+FDT
Sbjct: 138 KI-PIYIYSSGSVHAQKLLFANSIEGDMTKI-LYGYFDT 174



 Score = 57.2 bits (132), Expect = 9e-09
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +3

Query: 123 LLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDD 233
           LLLDIEGT TSISFVKD+LFPYA ENV ++L+  +D+
Sbjct: 11  LLLDIEGTITSISFVKDELFPYAFENVGNYLEEHYDN 47


>Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical
           protein C46F11.4 protein.
          Length = 811

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 281 DQEKSVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKQ 415
           D EK       +  +D  +ED+++  +  ++ Q SSD+KV+  K+
Sbjct: 100 DDEKPASSSSKLAADDDDEEDELDAFMAGIEKQASSDKKVSEQKE 144


>AL132860-3|CAB60514.2|  342|Caenorhabditis elegans Hypothetical
           protein Y56A3A.4 protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 96  GDIVKKSKV--LLLDIEGTTTSISFVKDKLFPYAEENVKDFLD 218
           G I++KSK+  L+  I  TT     VKD L  YA++ V   +D
Sbjct: 226 GSIMEKSKLDDLMQQISSTTVLEENVKDVLVEYADDFVSSLID 268


>Z79756-3|CAB02121.1|  527|Caenorhabditis elegans Hypothetical
           protein F53C11.4 protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 69  EMAKENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDDED 239
           E    N V G   KKSKV+ +    + + +S     L   A E+   +LD   DD D
Sbjct: 43  EWVVPNDVTGLNAKKSKVVKIRFHPSVSKLSSEGSALHQAACESALKYLDLLLDDSD 99


>AL110479-1|CAB60310.2|  311|Caenorhabditis elegans Hypothetical
           protein Y105C5B.1 protein.
          Length = 311

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = -3

Query: 481 IVVHVSLDVSFIITFFPDKPLELLQRGNFTVGRHLPF--DILNQTL------DLILFRSI 326
           +++HVS ++ FI+ F   +P +    G  +   H P   ++ N +       D+ LF SI
Sbjct: 35  LIIHVSNNIFFILLFIYKRPRKPENPGG-SENVHAPIFRELYNLSFLCVIFDDICLFTSI 93

Query: 325 LSGNGNQSFNTLLLIL 278
           L    N++   + LI+
Sbjct: 94  LGNEKNEASGFIFLIM 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,314,006
Number of Sequences: 27780
Number of extensions: 320790
Number of successful extensions: 890
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)