Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0150
         (551 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QAJ2 Cluster: Chromosome undetermined scaffold_71, wh...    33   5.8  
UniRef50_UPI0000F215EE Cluster: PREDICTED: similar to Rex2 prote...    32   7.7  
UniRef50_Q4A8A0 Cluster: ABC TRANSPORTER PERMEASE PROTEIN; n=3; ...    32   7.7  
UniRef50_Q8ZUW3 Cluster: Putative uncharacterized protein PAE257...    32   7.7  

>UniRef50_A7QAJ2 Cluster: Chromosome undetermined scaffold_71, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_71, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 741

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +1

Query: 4   SYSTLRPGDRARGPPGLKLSSLIKSCHLSLS*XINGKTVSTVNNDATGRPFEVXXKSVGK 183
           SY  L PG    G P  +++S  K+C L      +G T+    +DA     ++   S+G 
Sbjct: 207 SYYGLAPGTARGGSPSARIASY-KACSLE---GCSGSTIMKAFDDAIKDGVDIISVSIGM 262

Query: 184 FSIFQT 201
            SIFQ+
Sbjct: 263 TSIFQS 268


>UniRef50_UPI0000F215EE Cluster: PREDICTED: similar to Rex2 protein;
           n=3; Danio rerio|Rep: PREDICTED: similar to Rex2 protein
           - Danio rerio
          Length = 1278

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 244 KTKLGEPQKPLHY-CDECGET*QDTFSGQFEQRDH 345
           K+  G+PQKP +Y C++CG++ + TF      R H
Sbjct: 235 KSSSGKPQKPKNYHCEQCGKSFRSTFCLTIHIRAH 269


>UniRef50_Q4A8A0 Cluster: ABC TRANSPORTER PERMEASE PROTEIN; n=3;
           Mycoplasma hyopneumoniae|Rep: ABC TRANSPORTER PERMEASE
           PROTEIN - Mycoplasma hyopneumoniae (strain 7448)
          Length = 320

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = -2

Query: 334 VQIVLKMYPATSRRIHRNNATASEAHQVLFSILFFI--YYITCTKQLFEISKIFRRTSXP 161
           +QI +  Y A +  IH+ +     A  +LF++LFF+  + IT    LF     F  T+  
Sbjct: 1   MQISVAKYVAQNTIIHKMDPRLKIAFNILFAVLFFVTSHLITILILLFAALVFFYITTKK 60

Query: 160 LQRVF 146
           ++++F
Sbjct: 61  IKQIF 65


>UniRef50_Q8ZUW3 Cluster: Putative uncharacterized protein PAE2576;
           n=1; Pyrobaculum aerophilum|Rep: Putative
           uncharacterized protein PAE2576 - Pyrobaculum aerophilum
          Length = 203

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = -2

Query: 298 RRIHRNNATASEAHQVLFSILFFIYYITCTK---QLFEISKIFRRTSXPLQRVFR 143
           R +H +N + SEAH ++  ++   Y + C+K    +F + KI  +T    ++V R
Sbjct: 149 RAVHGDNISLSEAHAIILELIRSGYLVRCSKSGQDIFYMEKIHYQTYLNTEKVER 203


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,529,581
Number of Sequences: 1657284
Number of extensions: 9175080
Number of successful extensions: 18703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18695
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)