Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0150
         (551 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0302 - 24255456-24255935,24256723-24257604                       28   5.7  
02_04_0193 - 20801959-20802583,20803372-20803448,20803530-208036...    27   7.5  

>04_04_0302 - 24255456-24255935,24256723-24257604
          Length = 453

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 434 YVLEIDSVPLCESYKLKY 487
           Y L+I+  P+C++YKL Y
Sbjct: 375 YALDIEMCPICQNYKLVY 392


>02_04_0193 -
           20801959-20802583,20803372-20803448,20803530-20803646,
           20804147-20804250,20804359-20804428,20804547-20804644,
           20804747-20804840,20805269-20805359,20805453-20805545,
           20805635-20805960,20806162-20806641
          Length = 724

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 361 LSYRSNGLFVQIVLKMYPATSRRIHRNNATA 269
           LS+R+ GL V+  LK +PA + ++   + TA
Sbjct: 18  LSFRAMGLVVEQELKAFPAVAGKVQGKHKTA 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,234,976
Number of Sequences: 37544
Number of extensions: 242319
Number of successful extensions: 397
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)