Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0149
         (587 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DLV5 Cluster: Chromosome undetermined scaffold_556, w...    33   4.9  
UniRef50_Q12YA2 Cluster: Unusual protein kinase; n=1; Methanococ...    33   4.9  

>UniRef50_A0DLV5 Cluster: Chromosome undetermined scaffold_556,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_556,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1904

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = +3

Query: 15  NMLL*FVIKIKMYTYLSTRLSEPTSVGLSIILLSIKDYLFEKFEKKLRYINKKSLIDKEA 194
           N+L+ +    +    LS   +   S+ L + L SIKD      E+ L+YI +  LIDKE 
Sbjct: 658 NVLIHYSEATRRLNLLSDIFTNTKSLKLILKLFSIKD--INILEQTLKYIKRDRLIDKEF 715

Query: 195 RYK 203
            YK
Sbjct: 716 PYK 718


>UniRef50_Q12YA2 Cluster: Unusual protein kinase; n=1;
           Methanococcoides burtonii DSM 6242|Rep: Unusual protein
           kinase - Methanococcoides burtonii (strain DSM 6242)
          Length = 549

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +3

Query: 93  GLSIILLSIKDYLFEKFEKKLRYINKKSLIDKEARYKKNRVILIKKS 233
           G++ ++ +I+ Y FEK E+K + I    +ID  ++Y    +IL+  +
Sbjct: 470 GINDVIETIRGYRFEKLEEKTKEIKHDKIIDSLSKYVFLSIILVSSA 516


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,641,746
Number of Sequences: 1657284
Number of extensions: 8031572
Number of successful extensions: 20134
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20131
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)