Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0149
         (587 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1) ident...    29   2.3  
At3g63500.2 68416.m07153 expressed protein                             28   4.0  
At3g63500.1 68416.m07152 expressed protein                             28   4.0  
At2g43535.1 68415.m05409 trypsin inhibitor, putative similar to ...    28   4.0  
At5g51200.1 68418.m06349 expressed protein                             27   9.3  
At5g18280.1 68418.m02149 apyrase (APY2) identical to apyrase GI:...    27   9.3  
At3g04080.1 68416.m00432 apyrase (APY1) identical to apyrase (At...    27   9.3  

>At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1)
           identical to pseudo-response regulator 1 GI:7576354 from
           [Arabidopsis thaliana]; timing of CAB expression 1
           protein (TOC1) GI:9247019; contains Pfam profile
           PF00072:  Response regulator receiver domain; identical
           to cDNA ABI3-interacting protein 1 (aip1 gene)
           GI:6996312
          Length = 618

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 141 FEKKLRYINKKSLIDKEARYK 203
           F+KK+RY+N+K L ++  R K
Sbjct: 549 FDKKIRYVNRKRLAERRPRVK 569


>At3g63500.2 68416.m07153 expressed protein
          Length = 1162

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 102  IILLSIKDYLFEKFEKKLRYINKKSLIDKEARYKKNR 212
            + L   +++ FE+F K+L Y+NK     K++R K+ R
Sbjct: 909  VFLNFAREWKFERFCKELEYVNKIFSSSKDSRGKQLR 945


>At3g63500.1 68416.m07152 expressed protein
          Length = 887

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 102 IILLSIKDYLFEKFEKKLRYINKKSLIDKEARYKKNR 212
           + L   +++ FE+F K+L Y+NK     K++R K+ R
Sbjct: 634 VFLNFAREWKFERFCKELEYVNKIFSSSKDSRGKQLR 670


>At2g43535.1 68415.m05409 trypsin inhibitor, putative similar to
           SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis
           alba}
          Length = 97

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 248 IVIRNCDREVSKGARGRRCLEHRAAAAPCVMYLCININY 364
           I  RNC ++  KGA G +CL        C+   C N ++
Sbjct: 54  ICYRNCQKD--KGANGGKCLWGEGGKVKCLCDFCSNESF 90


>At5g51200.1 68418.m06349 expressed protein
          Length = 1808

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = +3

Query: 63   STRLSEPTSVGLSIILLSIKDYLFEKFEKKLRYINKKSLIDKEARYKKNRVILI 224
            ST+L +PT + L+ +L  + D L    EKK   ++K   I++ +R   + +I I
Sbjct: 1634 STKLRQPTLLLLASLLSHVTDSLERAAEKKSLLLHKIRDINELSRQDVDAIIKI 1687


>At5g18280.1 68418.m02149 apyrase (APY2) identical to apyrase
           GI:6006801, GI:7672685 from [Arabidopsis thaliana]
          Length = 472

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3

Query: 408 YIKIIYQKRRDYYN**LIFIHKYITHGAAAAR 313
           Y++ +Y K R Y+    +++H Y+ +G  AAR
Sbjct: 252 YVREMYLKGRKYF----LYVHSYLHYGLLAAR 279


>At3g04080.1 68416.m00432 apyrase (APY1) identical to apyrase
           (Atapy1) GI:6002631 from [Arabidopsis thaliana]
          Length = 471

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3

Query: 408 YIKIIYQKRRDYYN**LIFIHKYITHGAAAAR 313
           Y++ +Y K R Y+    +++H Y+ +G  AAR
Sbjct: 251 YVREMYLKGRKYF----LYVHSYLHYGLLAAR 278


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,457,535
Number of Sequences: 28952
Number of extensions: 172348
Number of successful extensions: 308
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)