Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0148
(612 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 40 2e-04
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 38 0.002
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 33 0.033
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 33 0.033
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 32 0.057
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 31 0.17
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.30
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 29 0.40
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 29 0.70
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 28 0.93
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 27 1.6
SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces po... 27 2.8
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 3.7
SPBC19C2.15c ||SPBC2F12.16|phosphoprotein phosphatase |Schizosac... 26 3.7
SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb... 26 3.7
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 26 4.9
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 26 4.9
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 25 6.5
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 25 8.6
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 25 8.6
SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ... 25 8.6
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 40.3 bits (90), Expect = 2e-04
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 14 GNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193
GN +D AL YT+AI+I+P +SN A+ + G A++ T L L P
Sbjct: 90 GNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPH 149
Query: 194 FPDAYCNL 217
A+ L
Sbjct: 150 HARAFGRL 157
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGN-IPEAIQSYRTAL 178
+ ++G ++ AL Y+RAI++NP ++ +L ++++ N I +A+ +Y+ A
Sbjct: 621 WCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESCHNQISDALDAYQRAA 680
Query: 179 KLKPDFP 199
+L P P
Sbjct: 681 ELDPTNP 687
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +2
Query: 11 MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKP 190
+G + D AL Y A++ NP A +A+I ++ P AI+ Y+T L P
Sbjct: 340 IGRLAELFDDQDKALSAYESALRQNPYSIPAMLQIATILRNREQFPLAIEYYQTILDCDP 399
Query: 191 DFPDAYCNLAHC 226
+ + L HC
Sbjct: 400 KQGEIWSALGHC 411
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 33.1 bits (72), Expect = 0.033
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 11 MGNTLKEMQDVAGALQCYTRAIQI--NPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184
+GN + + A A++ YT AI + + A A +SN A+ + G A+ + + ++
Sbjct: 29 IGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAKQSDRI 88
Query: 185 KPDFP 199
KPD P
Sbjct: 89 KPDVP 93
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 33.1 bits (72), Expect = 0.033
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 8 NMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK 187
N N + + A+ YT+AI+++ A +SN + H S + AI A++
Sbjct: 10 NEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECD 69
Query: 188 PDFPDAY 208
P++ AY
Sbjct: 70 PEYAKAY 76
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 32.3 bits (70), Expect = 0.057
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +2
Query: 11 MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKP 190
+ N ++ + AL+C RAIQ++P F A++ H + ++ S+R A+++
Sbjct: 437 LANCFSLQREHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRVNV 496
Query: 191 DFPDAYCNL 217
+A+ L
Sbjct: 497 RHYNAWYGL 505
Score = 29.1 bits (62), Expect = 0.53
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 11 MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALK 181
+G K+ + A C+ A+ INP A NL +I D+ N+ I Y TA+K
Sbjct: 121 LGTMYKKAGFLKKATDCFVEAVSINPYNFSAFQNLTAIGVPLDANNV-FVIPPYLTAMK 178
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 30.7 bits (66), Expect = 0.17
Identities = 15/72 (20%), Positives = 35/72 (48%)
Frame = +2
Query: 5 SNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184
+ +G + +++ + C+ +A+Q P+ + L + ++ EA+ SY A+ L
Sbjct: 442 AGLGIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSL 501
Query: 185 KPDFPDAYCNLA 220
+P + N+A
Sbjct: 502 QPQYVRVRSNMA 513
Score = 28.3 bits (60), Expect = 0.93
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +2
Query: 2 YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181
++ +G L + A+ Y RA+ + P + SN+A + + G +A + A+
Sbjct: 475 WNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNMAVSNINLGYFEDAAKHLLAAID 534
Query: 182 L 184
+
Sbjct: 535 I 535
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.30
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +3
Query: 294 AAGEKQTAISTSAPLHVVSADT*L*EGHRRPSREPLLGESASVAQ 428
+AG TA STSAPL + D G+ RP E L E V+Q
Sbjct: 1095 SAGRSSTAASTSAPLTYPAGDRSHIPGNLRPIYEMLNAELQRVSQ 1139
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1389
Score = 29.5 bits (63), Expect = 0.40
Identities = 13/75 (17%), Positives = 36/75 (48%)
Frame = +2
Query: 2 YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181
++ +G + + V A CY +++ +N + +N ++ + ++ A ++ ++
Sbjct: 933 WNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSGVWANYGALCIQNHDVECANAAFTRSIS 992
Query: 182 LKPDFPDAYCNLAHC 226
+ PD A+ A+C
Sbjct: 993 IDPDNSQAWLGKAYC 1007
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 50 ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193
A+ + A++I+P +A S L + SG A++++ A L PD
Sbjct: 669 AIVHFQSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILDPD 716
Score = 25.8 bits (54), Expect = 4.9
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 2 YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181
++N G + DV A +TR+I I+P + A A G+I +A+Q A +
Sbjct: 967 WANYGALCIQNHDVECANAAFTRSISIDPDNSQAWLGKAYCSIAVGSIRKAVQIIHHAFE 1026
Query: 182 L 184
+
Sbjct: 1027 I 1027
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 28.7 bits (61), Expect = 0.70
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +2
Query: 5 SNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184
S +GN + + A+ + RA+Q+N + A + + + + N AI+SYR A+ +
Sbjct: 342 SIIGNYYSLLSEHEKAVTYFKRALQLNRNYLSAWTLMGHEYVELKNTHAAIESYRLAVDV 401
Query: 185 KPDFPDAYCNLAHCLQIV 238
A+ L +++
Sbjct: 402 NRKDYRAWYGLGQTYEVL 419
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 28.3 bits (60), Expect = 0.93
Identities = 15/81 (18%), Positives = 35/81 (43%)
Frame = +2
Query: 8 NMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK 187
++G + D+ A+ C+ +++INP + A++++ L +
Sbjct: 526 SLGKYYYKKGDLLQAMNCFNESLKINPLSYPTWFTYGCAALELQKYDAAMEAFSRCLSIN 585
Query: 188 PDFPDAYCNLAHCLQIVCDWT 250
P+ +++ NLA + D T
Sbjct: 586 PEDGESWNNLASAMLKAKDHT 606
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 14 GNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193
GN +D A+ +T+AI ++ +SN ++ + + +A++ +LKPD
Sbjct: 9 GNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKCTELKPD 68
Query: 194 F 196
+
Sbjct: 69 W 69
>SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 278
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 296 CSATMLTNFFIR--ASNPSSHTLFVNSGLNCNT 204
C++T +T + A+ HTLF ++GL+C T
Sbjct: 154 CTSTAITGCLLNYGATYNYDHTLFKDNGLSCET 186
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 184 KLKRCSVRLYSFRNVTRIFVDAGQIAMSIRKCGINL 77
K+KRCS ++ R +T++ D +I +S IN+
Sbjct: 395 KIKRCSFPIHGVRLITKLQFDDDKIIVSTCSPRINI 430
>SPBC19C2.15c ||SPBC2F12.16|phosphoprotein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 208
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 603 TFVPVVRTEGIAEYFHFLFGHANQVPIAS 517
T V V+T IAE FH +FG + P+ +
Sbjct: 47 TLVRWVQTLAIAEVFHSIFGLVSSSPLTT 75
>SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 955
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 510 IRMVTEIAAYVPDTKAAL*ISRELVRVFVQHLHF 409
++ + E+ Y + I ELVR+ V+HLH+
Sbjct: 339 LKQMVELDVYAEARQLFAPIYLELVRIIVRHLHY 372
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 394 NLCLEKVQVLHKNPYKFPRDLQGRL-RIGYVSSDF 495
++CL ++Q KNP KF L+ R+ RI Y + F
Sbjct: 193 SICLYEIQEEKKNPKKFQLVLKSRICRIEYNVTKF 227
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 25.8 bits (54), Expect = 4.9
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = +3
Query: 501 PSESHLMQSVPGLHDRTKSGNILLCPQSGRRE 596
P+E+ + +VPG+ +R + ++ P+ R++
Sbjct: 556 PAEAEAVPAVPGMPERFTAADLAAVPEESRKQ 587
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -2
Query: 371 FLKSCVSGYNMEW--CGCTDGSLFFS 300
FL S + N+ W CGC G++FF+
Sbjct: 494 FLTSVIGYGNVMWIFCGCMWGAIFFT 519
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 110 NLASIHKDSGNIPEAIQSYRTALKLKPDFPDA 205
NLA ++ GN A ++Y + L+ P F DA
Sbjct: 519 NLARCEEELGNTSVASEAYVSILEKHPSFIDA 550
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 526 DCIKCDSDGYRNRCLRTRYEGGL 458
DCI+ D DGYR C T G L
Sbjct: 144 DCIE-DEDGYRFNCKNTGRRGTL 165
>SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 607
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 258 LKSVQSHTICKQWAKLQYASGKSGLSLSAVLYDC 157
+KS+QS Q++K ++ +SLS+VLY C
Sbjct: 96 IKSLQSFEKDFQFSKEKFKPCSCQVSLSSVLYHC 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,805,118
Number of Sequences: 5004
Number of extensions: 60689
Number of successful extensions: 220
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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